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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4he8I_

Fold library idPDB HeaderMoleculeTitle
c4he8I_PDB header: oxidoreductaseChain: I: PDB Molecule: nadh-quinone oxidoreductase subunit 14;PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 thermus thermophilus


Added to library: Sat Feb 16 09:08:05 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTLAILAVFSVALTLLGFVLPPQGVKRATLLGLALALASLLLTWGKPFAFGPYAVDGVSQVFTLLALLGA
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Known secondary structure (DSSP)
TTTS
TTT


SSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence LWTVGLVRSGRFEFYLLVLYAALGMHLLASTRHLLLMLVALEALSLPLYALATWRRGQGLEAALKYFLLG
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Known secondary structure (DSSP) T


S
TTB
BT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALAAAFFLYGAALFYGATGSLVLGAPGEGPLYALALGLLLVGLGFKAALAPFHFWTPDVYQGSPTPVVLF
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Known secondary structure (DSSP) SS
SBTT



STT
TTS
TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MATSVKAAAFAALLRVAAPPEALALLVALSVVVGNLAALAQKEAKRLLAYSSIAHAGYMALALYTGNAQA
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Known secondary structure (DSSP) S


T

BGGGGGTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LGFYLLTYVLATGLAFAVLSQISPDRVPLEALRGLYRKDPLLGLAFLVAMLSLLGLPPLAGFWGKYLAFA
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Known secondary structure (DSSP)
SS

BGGGGTT
T
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EAARAGAWGVLVLALVTSAVSAYYYLGLGLAVFARPEETPFRPGPPWARAAVVAAGVLLLALGLLPGLVL
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Known secondary structure (DSSP) T
TTGGGS


S







G
 .......
Sequence PALAAGG
Predicted secondary structure

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Known secondary structure (DSSP) GGSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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