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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4he4A_

Fold library idPDB HeaderMoleculeTitle
c4he4A_PDB header: fluorescent proteinChain: A: PDB Molecule: yellow fluorescent protein;PDBTitle: crystal structure of the yellow fluorescent protein phiyfp (phialidium2 sp.)


Added to library: Sat Jun 8 09:14:19 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSSGALLFHGKIPYVVEMEGNVDGHTFSIRGKGYGDASVGKVDAQFICTTGDVPVPWSTLVTTLAQCFAK
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Known secondary structure (DSSP)

SGGGGGSS
TTTTTTSSS

SS
GGGGTTT

GGGSB
 .........80.........90.........100.........110.........120.........130.........140
Sequence YGPELKDFYKSCMPDGYVQERTITFEGDGNFKTRAEVTFENGSVYNRVKLNGQGFKKDGHVLGKNLEFNF
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Known secondary structure (DSSP)

TTS

TTTT
TTS
TT


TTSTTTTT
B
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence TPHCLYIWGDQANHGLKSAFKICHEITGSKGDFIVADHTQMNTPIGGGPVHVPEYHHMSYHVKLSKDVTD
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Known secondary structure (DSSP)

GGGTBTT
SS
SS
S





S

TTS
 .........220.........230.
Sequence HRDNMSLKETVRAVDCRKTYD
Predicted secondary structure





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Known secondary structure (DSSP)
S

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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