PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4h54B_

Fold library id	PDB Header	Molecule	Title
c4h54B_	PDB header: transferase	Chain: B: PDB Molecule: diguanylate cyclase ydeh;	PDBTitle: crystal structure of the diguanylate cyclase dgcz

Links to external resources
Added to library: Sat Jul 6 11:58:11 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A I K K T T E I D A I L L N L N K A I D A H Y Q W L V S M F H S V V A R D N D E L P Y V R L M D S A H Q H M H N C G R E L M L A I V E N H W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q D A H F D A F Q E G L L S F T A A L T D Y K I Y L L T I R S N M D V L T G L P G R R V L D E S F D H Q L R N A E P L N L Y L M L L D I D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B
T T T
S B B T T T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F K L V N D T Y G H L I G D V V L R T L A T Y L A S W T R D Y E T V Y R Y G G E E F I I I V K A A N D E E A C R A G V R I C Q L V D N H A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S S S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . .

Sequence T H S E G H I N I T V T A G V S R A F P E E P L D V V I G R A D R A M Y E G K Q T G R N R C M F I D E Q N V I N R V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T S S S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	K	K	T	T	E	I	D	A	I	L	L	N	L	N	K	A	I	D	A	H	Y	Q	W	L	V	S	M	F	H	S	V	V	A	R	D	N	D	E	L	P	Y	V	R	L	M	D	S	A	H	Q	H	M	H	N	C	G	R	E	L	M	L	A	I	V	E	N	H	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T																																	T	T	T																											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	A	H	F	D	A	F	Q	E	G	L	L	S	F	T	A	A	L	T	D	Y	K	I	Y	L	L	T	I	R	S	N	M	D	V	L	T	G	L	P	G	R	R	V	L	D	E	S	F	D	H	Q	L	R	N	A	E	P	L	N	L	Y	L	M	L	L	D	I	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																S	B		T	T	T		S	B	B														T	T	T	T	S										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	K	L	V	N	D	T	Y	G	H	L	I	G	D	V	V	L	R	T	L	A	T	Y	L	A	S	W	T	R	D	Y	E	T	V	Y	R	Y	G	G	E	E	F	I	I	I	V	K	A	A	N	D	E	E	A	C	R	A	G	V	R	I	C	Q	L	V	D	N	H	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S		S	S	S						S	S	S									S	S																		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Sequence	T	H	S	E	G	H	I	N	I	T	V	T	A	G	V	S	R	A	F	P	E	E	P	L	D	V	V	I	G	R	A	D	R	A	M	Y	E	G	K	Q	T	G	R	N	R	C	M	F	I	D	E	Q	N	V	I	N	R	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																T	T																					T	S	S	S						T	T	S