PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4h05B_

Fold library id	PDB Header	Molecule	Title
c4h05B_	PDB header: transferase	Chain: B: PDB Molecule: aminoglycoside-o-phosphotransferase viii;	PDBTitle: crystal structure of aminoglycoside-3'-phosphotransferase of type viii

Links to external resources
Added to library: Sat Apr 12 08:28:13 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H H H M D D A L R A L R G R Y P G C E W V V V E D G A S G A G V Y R L R G G G R E L F V K V A A L G A G V G L L G E A E R L V W L A E V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
G G G
S S
S S S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I P V P R V V E G G G D E R V A W L V T E A V P G R P A S A R W P R E Q R L D V A V A L A G L A R S L H A L D W E R C P F D R S L A V T V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T S
T S
G G G
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q A A R A V A E G S V D L E D L D E E R K G W S G E R L L A E L E R T R P A D E D L A V C H G D L C P D N V L L D P R T C E V T G L I D V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S S
T T T T T
T
S
S
G G G
T T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 .

Sequence R V G R A D R H S D L A L V L R E L A H E E D P W F G P E C S A A F L R E Y G R G W D G A V S E E K L A F Y R L L D E F F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S S S
T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	H	M	D	D	A	L	R	A	L	R	G	R	Y	P	G	C	E	W	V	V	V	E	D	G	A	S	G	A	G	V	Y	R	L	R	G	G	G	R	E	L	F	V	K	V	A	A	L	G	A	G	V	G	L	L	G	E	A	E	R	L	V	W	L	A	E	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	T	T							S			G	G	G									S	S										S	S	S	S																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	P	V	P	R	V	V	E	G	G	G	D	E	R	V	A	W	L	V	T	E	A	V	P	G	R	P	A	S	A	R	W	P	R	E	Q	R	L	D	V	A	V	A	L	A	G	L	A	R	S	L	H	A	L	D	W	E	R	C	P	F	D	R	S	L	A	V	T	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S											S			T	T	S																							T	S		G	G	G				B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	A	A	R	A	V	A	E	G	S	V	D	L	E	D	L	D	E	E	R	K	G	W	S	G	E	R	L	L	A	E	L	E	R	T	R	P	A	D	E	D	L	A	V	C	H	G	D	L	C	P	D	N	V	L	L	D	P	R	T	C	E	V	T	G	L	I	D	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S		S	S	S	S		T	T	T	T	T													T			S									S				G	G	G					T	T	T										T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Sequence	R	V	G	R	A	D	R	H	S	D	L	A	L	V	L	R	E	L	A	H	E	E	D	P	W	F	G	P	E	C	S	A	A	F	L	R	E	Y	G	R	G	W	D	G	A	V	S	E	E	K	L	A	F	Y	R	L	L	D	E	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						T												T		S	S	S	S																	T		S																T	T