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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4gy5A_ | PDB header: ligase | Chain: A: PDB Molecule: e3 ubiquitin-protein ligase uhrf1; | PDBTitle: crystal structure of the tandem tudor domain and plant homeodomain of2 uhrf1 with histone h3k9me3 |
Added to library: Thu Jan 10 03:53:24 2013 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | L | Y | K | V | N | E | Y | V | D | A | R | D | T | N | M | G | A | W | F | E | A | Q | V | V | R | V | T | R | K | E | D | V | I | Y | H | V | K | Y | D | D | Y | P | E | N | G | V | V | Q | M | N | S | R | D | V | R | A | R | A | R | T | I | I | K | W | Q | D | L | E | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | B | G | G | G | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | Q | V | V | M | L | N | Y | N | P | D | N | P | K | E | R | G | F | W | Y | D | A | E | I | S | R | K | R | E | T | R | T | A | R | E | L | Y | A | N | V | V | L | G | D | D | S | L | N | D | C | R | I | I | F | V | D | E | V | F | K | I | E | R | P | G | E | G | S | P | M |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | B | T | T | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | D | N | P | M | R | R | K | S | G | P | S | C | K | H | C | K | D | D | V | N | R | L | C | R | V | C | A | C | H | L | C | G | G | R | Q | D | P | D | K | Q | L | M | C | D | E | C | D | M | A | F | H | I | Y | C | L | D | P | P | L | S | S | V | P | S | E | D | E | W | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | T | T | T | T | T | S | S | S | S | S | B | S | S | S | S | S | G | G | G | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | S |   | . | . | . | . | . | ||||||||||||||||||||||||
Sequence | C | P | E | C | R | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | G |
Download: | PDB structure | FASTA sequence |
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