PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gxhC_

Fold library id	PDB Header	Molecule	Title
c4gxhC_	PDB header: hydrolase	Chain: C: PDB Molecule: pyrrolidone-carboxylate peptidase;	PDBTitle: crystal structure of a pyrrolidone-carboxylate peptidase 1 (target id2 nysgrc-012831) from xenorhabdus bovienii ss-2004

Links to external resources
Added to library: Sat Sep 22 14:27:51 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K T I L V T A F D P F G G E A I N P S W E A I K P L Q G S Q V F G A N I E I C Q I P C I F D T S L E H L Y A A V D K Y Q P E L V I S V G Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G T T
T T
S S T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G G R T N I T V E R V A I N I N D A R I P D N A G N Q P I D T P V I V D G P A A Y F S R L P I K T X V N A L N T A G I P A S V S Q T A G T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S
S S
T T S
S S T T
S
S
T T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . .

Sequence V C N H V X Y G L L H Y L A Q N T P S V R G G F I H V P Y L P E Q A V K D G N Q S S X T L X L X T L A L K I A I E T A W K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B
S
S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	T	I	L	V	T	A	F	D	P	F	G	G	E	A	I	N	P	S	W	E	A	I	K	P	L	Q	G	S	Q	V	F	G	A	N	I	E	I	C	Q	I	P	C	I	F	D	T	S	L	E	H	L	Y	A	A	V	D	K	Y	Q	P	E	L	V	I	S	V	G	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S	S								G	G	G	T	T				T	T										S	S	T	T																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	R	T	N	I	T	V	E	R	V	A	I	N	I	N	D	A	R	I	P	D	N	A	G	N	Q	P	I	D	T	P	V	I	V	D	G	P	A	A	Y	F	S	R	L	P	I	K	T	X	V	N	A	L	N	T	A	G	I	P	A	S	V	S	Q	T	A	G	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	S									S					S	S			T	T	S								S	S	T	T			S						S												T	T							S				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Sequence	V	C	N	H	V	X	Y	G	L	L	H	Y	L	A	Q	N	T	P	S	V	R	G	G	F	I	H	V	P	Y	L	P	E	Q	A	V	K	D	G	N	Q	S	S	X	T	L	X	L	X	T	L	A	L	K	I	A	I	E	T	A	W	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S									B								S		S			B