PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gxbA_

Fold library id	PDB Header	Molecule	Title
c4gxbA_	PDB header: protein transport/cell adhesion	Chain: A: PDB Molecule: sorting nexin-17;	PDBTitle: structure of the snx17 atypical ferm domain bound to the npxy motif of2 p-selectin

Links to external resources
Added to library: Sat Mar 16 08:21:20 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V P T E E V S L E V L L S N G Q K V L V N V L T S D Q T E D V L E A V A A K L D L P D D L I G Y F S L F L V R E K E D G A F S F V R K L Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
G G G G G G
T T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F E L P Y V S V T S L R S Q E Y K I V L R K S Y W D S A Y D D D V M E N R V G L N L L Y A Q T V S D I E R G W I L V T K E Q H R Q L K S L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T
G G G T T S T T S S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E K V S K K E F L R L A Q T L R H Y G Y L R F D A C V A D F P E K D C P V V V S A G N S E L S L Q L R E G S F R V T R M R C W R V T S S V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S B T T T
S S S S T T T T
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .

Sequence L P S G G R G E V R L E L A F E Y L M S K D R L Q W V T I T S P Q A I M M S I C L Q S M V D E L M V K K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
B
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	T	E	E	V	S	L	E	V	L	L	S	N	G	Q	K	V	L	V	N	V	L	T	S	D	Q	T	E	D	V	L	E	A	V	A	A	K	L	D	L	P	D	D	L	I	G	Y	F	S	L	F	L	V	R	E	K	E	D	G	A	F	S	F	V	R	K	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T										T	T															T			G	G	G	G	G	G										T	T	S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	E	L	P	Y	V	S	V	T	S	L	R	S	Q	E	Y	K	I	V	L	R	K	S	Y	W	D	S	A	Y	D	D	D	V	M	E	N	R	V	G	L	N	L	L	Y	A	Q	T	V	S	D	I	E	R	G	W	I	L	V	T	K	E	Q	H	R	Q	L	K	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T			T	T												G	G	G					T	T	S																	T	T	S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	K	V	S	K	K	E	F	L	R	L	A	Q	T	L	R	H	Y	G	Y	L	R	F	D	A	C	V	A	D	F	P	E	K	D	C	P	V	V	V	S	A	G	N	S	E	L	S	L	Q	L	R	E	G	S	F	R	V	T	R	M	R	C	W	R	V	T	S	S	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										T	T	S	B	T	T	T										S	S	S	S	T	T									T	T													G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Sequence	L	P	S	G	G	R	G	E	V	R	L	E	L	A	F	E	Y	L	M	S	K	D	R	L	Q	W	V	T	I	T	S	P	Q	A	I	M	M	S	I	C	L	Q	S	M	V	D	E	L	M	V	K	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B							B													T	T										T	T