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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gx2B_

Fold library idPDB HeaderMoleculeTitle
c4gx2B_PDB header: transport proteinChain: B: PDB Molecule: trka domain protein;PDBTitle: gsuk channel bound to nad


Added to library: Wed Jan 9 23:51:02 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RQNLKVLLLYCAFLLVMLLAYASIFRYLMWHLEGRAYSFMAGIYWTITVMTTLGFGDITFESDAGYLFAS
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Known secondary structure (DSSP)





TT



SS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IVTVSGVIFLDIILPFGFVSMFLAPWIERRLRYHPTIELPDDTRGHILIFGIDPITRTLIRKLESRNHLF
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Known secondary structure (DSSP) TTTS


B



TT

S
S

TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLSDPDNANLCLTVRSLCQTPIIAV
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Known secondary structure (DSSP) S
TTS
SSS
TT
TTSSS
S
S
TTT




 .........220.........230.........240.........250.........260.........270.........280
Sequence VKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVHGTPFAGKTIGESG
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Known secondary structure (DSSP)
SSGGGT
S

TTSSS



GGGT

TTSTTTTSBT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGHGRIGCAA
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Known secondary structure (DSSP)


SS



TT
B

TT





SS



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence AAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLH
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Known secondary structure (DSSP) TTTT

SS

SS

SS
S
SSSTTTTGGG
S

S

 .........430.........440.........450.........460.........470.........480.........490
Sequence SHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEHKESAFLSEGMAVFRRPLPPAMAGKTIA
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Known secondary structure (DSSP) SSSSSGGGT
SGGGGTT


GGGTT
B
 .........500.........510.........520.........530.........540........
Sequence ETRLRPLTGCSIVAIEAPDRADILISPPPETILAEGARLILIGTSEQEKTFDQTIAAR
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Known secondary structure (DSSP) T
TTTT


TT
S
S

TT
B

SS

TTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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