Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gwpG_

Fold library idPDB HeaderMoleculeTitle
c4gwpG_PDB header: transcriptionChain: G: PDB Molecule: mediator of rna polymerase ii transcription subunit 6;PDBTitle: structure of the mediator head module from s. cerevisiae


Added to library: Wed Jan 9 22:55:18 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNVTPLDELQWKSPEWIQVFGLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPNAFAYVDPARRQ
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)




SS

B

STTTTT

SSTS


S

S




S







 .........80.........90.........100.........110.........120.........130.........140
Sequence ILFKYPMYMQLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANIYQ
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)


STS
TT
SSTT


TT


TT
 .........150.........160.........170
Sequence SPTIFKIVQSRLMSTSYHLNSTLESLYDLI
Predicted secondary structure



SS confidence





























Known secondary structure (DSSP)


TTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D