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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4gwpB_

Fold library idPDB HeaderMoleculeTitle
c4gwpB_PDB header: transcriptionChain: B: PDB Molecule: mediator of rna polymerase ii transcription subunit 17;PDBTitle: structure of the mediator head module from s. cerevisiae


Added to library: Sat Nov 3 15:30:25 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NENGETDDNIETVMTQEQFVKRRRDMLEHINLAMNESSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKP
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TT




SS
SSTTST




 .........80.........90.........100.........110.........120.........130.........140
Sequence SSLNSDKIPYVAPTKKEYIELDILNKGWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDV
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SSSS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IFKIRDRTSGQKLLAIKYGYEDSGSTYKHDRGIANIRNNIESQNLDLIPHGTDFVHSVKKFLRVRIFTKI
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SS
SSSS


S

SS


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S




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SS





 .........220.........230.........240.........250.........260.........270.........280
Sequence ESEDDYILSGESVMDRDSESEEAETKDIRKQIQLLKKIIFEKELMYQIKKECALLISYGVSIENENKVII
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Known secondary structure (DSSP) TTS
S






S
SS



TT
TTSSS

BTTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELPNEKFEIELLSLDDDSIVNHEQDLPKINDKRANLMLVMLRLLLVVIFKKTLRSRISSPHGLINLNVDD
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Known secondary structure (DSSP) TTTT

TT
S









STT


S

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence DILIIRPILGKVRFANYKLLLKKIIKDYVLDIVPGSSITETEVEREQPQENKNIDDENITKLNKEIRAFD
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Known secondary structure (DSSP) TTTTT
SSS


SSSS
SS
TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence KLLNIPRRELKINLPLTEHKSPNLSLMLESPNYCNALIHIKFSAGTEANAVSFDVEDFLHFIVAEYIQQK
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B

SS

STT


SSS


S
 ..
Sequence KV
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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