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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gvgB_

Fold library idPDB HeaderMoleculeTitle
c4gvgB_PDB header: hydrolaseChain: B: PDB Molecule: beta-hexosaminidase;PDBTitle: crystal structure of salmonella typhimurium family 3 glycoside2 hydrolase (nagz)


Added to library: Wed Jan 9 14:42:01 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGPVMLNVEGCELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVDQEGGRVQR
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Known secondary structure (DSSP)

S

SSSS

TSTT
GGG
S

SS


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPA
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Known secondary structure (DSSP)

TTS




TTT




B



S
STTTGGGSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KALAMATRFIDGMHDAGMKTTGKHFPGHGAVTETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVI
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Known secondary structure (DSSP) T


T

TT




B



TTT

S
S
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence YRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMGSYAERAQASLDAGCDMILVCNNRKGAVSVLDN
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Known secondary structure (DSSP)
TTT
SS
GGG







T


STT


T
S

S
 .........290.........300.........310.........320.........330
Sequence LSPIKAERVTRLYHKGSFSRRELMDSARWKTASAQLNQLHERWQEEKAGH
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Known secondary structure (DSSP) S




GGGGGG






ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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