PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gqaC_

Fold library id	PDB Header	Molecule	Title
c4gqaC_	PDB header: oxidoreductase	Chain: C: PDB Molecule: nad binding oxidoreductase;	PDBTitle: crystal structure of nad binding oxidoreductase from klebsiella2 pneumoniae

Links to external resources
Added to library: Sat Sep 15 15:17:56 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R L N I G L I G S G F X G Q A H A D A Y R R A A X F Y P D L P K R P H L Y A L A D Q D Q A X A E R H A A K L G A E K A Y G D W R E L V N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S S S
S S T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P Q V D V V D I T S P N H L H Y T X A X A A I A A G K H V Y C E K P L A V N E Q Q A Q E X A Q A A R R A G V K T X V A F N N I K T P A A L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G T T
S
S
S S T
G G G T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A K Q I I A R G D I G E P V R F R G T F D Q G F Y N D P N L P W S W R C S K T L G G S G A L G D L G A H T L S V A Q F L L G G I R E V T A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S T T S T T S
G G G
T T T T
S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A Q T C L R Q R P V P Q D A E W R E V E N D D Q V Q C L V N F D S G A A G V I E A S R I A A G R I F G V F W E V S G T E G T L Y X D G E R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T S
S
T T
S S T T G G G T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence N E L Q V Y R F N D D K H D R G F K T L Y A G S Q I P A Y A G F F G F D F G G G G L G Y F D V K V I E V H D L V Q G I C G D D D C Y P N F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
G G G
B T T
G G G G G T
S S
B
S S S S
S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . .

Sequence F G L Q N Q R V L S A I E A S X V S R R W V N V V K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	L	N	I	G	L	I	G	S	G	F	X	G	Q	A	H	A	D	A	Y	R	R	A	A	X	F	Y	P	D	L	P	K	R	P	H	L	Y	A	L	A	D	Q	D	Q	A	X	A	E	R	H	A	A	K	L	G	A	E	K	A	Y	G	D	W	R	E	L	V	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																		T	T	S	S	S										S	S												T		S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Q	V	D	V	V	D	I	T	S	P	N	H	L	H	Y	T	X	A	X	A	A	I	A	A	G	K	H	V	Y	C	E	K	P	L	A	V	N	E	Q	Q	A	Q	E	X	A	Q	A	A	R	R	A	G	V	K	T	X	V	A	F	N	N	I	K	T	P	A	A	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S		G	G	G											T	T							S		S		S	S															T								G	G	G	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	Q	I	I	A	R	G	D	I	G	E	P	V	R	F	R	G	T	F	D	Q	G	F	Y	N	D	P	N	L	P	W	S	W	R	C	S	K	T	L	G	G	S	G	A	L	G	D	L	G	A	H	T	L	S	V	A	Q	F	L	L	G	G	I	R	E	V	T	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T		S												S	T	T	S	T	T	S				G	G	G		T	T	T	T			S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	Q	T	C	L	R	Q	R	P	V	P	Q	D	A	E	W	R	E	V	E	N	D	D	Q	V	Q	C	L	V	N	F	D	S	G	A	A	G	V	I	E	A	S	R	I	A	A	G	R	I	F	G	V	F	W	E	V	S	G	T	E	G	T	L	Y	X	D	G	E	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																S		S									T	T	S									S			T	T		S	S									T	T							G	G	G	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	E	L	Q	V	Y	R	F	N	D	D	K	H	D	R	G	F	K	T	L	Y	A	G	S	Q	I	P	A	Y	A	G	F	F	G	F	D	F	G	G	G	G	L	G	Y	F	D	V	K	V	I	E	V	H	D	L	V	Q	G	I	C	G	D	D	D	C	Y	P	N	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T	T	S		G	G	G									B	T	T		G	G	G	G	G	T				S	S		B																					S	S	S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Sequence	F	G	L	Q	N	Q	R	V	L	S	A	I	E	A	S	X	V	S	R	R	W	V	N	V	V	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S