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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gpkI_

Fold library idPDB HeaderMoleculeTitle
c4gpkI_PDB header: transcription, peptide binding proteinChain: I: PDB Molecule: nprr;PDBTitle: crystal structure of nprr in complex with its cognate peptide nprx


Added to library: Sat Jul 6 09:18:15 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VEEDVKGKLDEWLNALVHLDKQQVERIYEELQGEMKHVLDFEIINYYKLLYTRYLIMKRDISALEEELDK
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Known secondary structure (DSSP)


TT
TTS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKKVYKKYSPFQKLLYMYGRGLLCCLQYRWKDGLDYLLKTEVMAKEQGYHETGLYYNIALAYTHLDIHHL
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Known secondary structure (DSSP) TTTTTS
TT
T


T
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AIHFVNMALEGFRSEYKFRNIINCQILIAVSYTEKGQYEEALKMYESILREATSFADKDVLLAITLSNMG
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Known secondary structure (DSSP) TTT
T
TTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SIYYKKGKYQQAKKYYLDSLQLQKQIDLNYLDTIYEMALVCIKLEELEEARTLIDKGIDAAKQEERFNAK
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Known secondary structure (DSSP) T
TT

S
STT
SGGG
 .........290.........300.........310.........320.........330.........340....
Sequence LYLLLMLRYKYFEEAKDYKAFLENEAIPLYELKKVYVELAEHFSSLSRFEESNRYYRLVIDLMN
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Known secondary structure (DSSP) TS
STTTSTTT



TTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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