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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4gmjB_

Fold library idPDB HeaderMoleculeTitle
c4gmjB_PDB header: rna binding proteinChain: B: PDB Molecule: ccr4-not transcription complex subunit 7;PDBTitle: structure of human not1 mif4g domain co-crystallized with caf1


Added to library: Sat Oct 6 13:15:16 2012
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence QRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGL
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TT

TTSTTTTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence TFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCE
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Known secondary structure (DSSP)
TTS


SS

B


TTTS


T


B
TSSSSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELE
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Known secondary structure (DSSP) T
SS
TS


SS
S
GGGSTT

S
TT

 .........220.........230.........240.........250.........260....
Sequence RIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGSGSGNAYEEE
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Known secondary structure (DSSP)

S
TTSTT


TT

TTSSTT


SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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