PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gkfA_

Fold library id	PDB Header	Molecule	Title
c4gkfA_	PDB header: unknown function	Chain: A: PDB Molecule: crispr system cmr subunit cmr5;	PDBTitle: crystal structure and characterization of cmr5 protein from pyrococcus2 furiosus

Links to external resources
Added to library: Fri Feb 1 11:45:16 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R K T L E Q R R G E Y A Y Y V I K E V A D L N D K Q L E E K Y A S L V K K A P V M I L S N G L L Q T L A F L L A K A E T S P E K A N Q I L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V N E Y P P R F I E K L G N D K D E H L L L Y L H I V Y W L R E N V D R N I D V K T L L S Q D Y S K V L W A T K E A I A L L N W M R R F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
G G G S
S S
T
T T
S T T G G G T S

. . . . . .

Sequence V A M L K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	K	T	L	E	Q	R	R	G	E	Y	A	Y	Y	V	I	K	E	V	A	D	L	N	D	K	Q	L	E	E	K	Y	A	S	L	V	K	K	A	P	V	M	I	L	S	N	G	L	L	Q	T	L	A	F	L	L	A	K	A	E	T	S	P	E	K	A	N	Q	I	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																				T																																			T	T											T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	N	E	Y	P	P	R	F	I	E	K	L	G	N	D	K	D	E	H	L	L	L	Y	L	H	I	V	Y	W	L	R	E	N	V	D	R	N	I	D	V	K	T	L	L	S	Q	D	Y	S	K	V	L	W	A	T	K	E	A	I	A	L	L	N	W	M	R	R	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	S	S				G	G	G	S		S	S																			T		T	T		S	T	T	G	G	G	T	S
	.	.	.	.	.	.
Sequence	V	A	M	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)