PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gibA_

Fold library id	PDB Header	Molecule	Title
c4gibA_	PDB header: isomerase	Chain: A: PDB Molecule: beta-phosphoglucomutase;	PDBTitle: 2.27 angstrom crystal structure of beta-phosphoglucomutase (pgmb) from2 clostridium difficile

Links to external resources
Added to library: Sat Aug 25 15:05:46 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M I E A F I F D L D G V I T D T A Y Y H Y M A W R K L A H K V G I D I D T K F N E S L K G I S R M E S L D R I L E F G N K K Y S F S E E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T B T T T B
T T T
T T G G G G T T T
T T
T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V R M A E E K N N Y Y V S L I D E I T S N D I L P G I E S L L I D V K S N N I K I G L S S A S K N A I N V L N H L G I S D K F D F I A D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S
T T T T
S
T T T
G G G
S
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K C K N N K P H P E I F L M S A K G L N V N P Q N C I G I E D A S A G I D A I N S A N M F S V G V G N Y E N L K K A N L V V D S T N Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S
T T S S T
G G G S S T T
S
T T T T T T S S S S G G G

. . . . . . . . . 220 . . . . . .

Sequence F E Y I Q E K Y N E Y I V R R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	I	E	A	F	I	F	D	L	D	G	V	I	T	D	T	A	Y	Y	H	Y	M	A	W	R	K	L	A	H	K	V	G	I	D	I	D	T	K	F	N	E	S	L	K	G	I	S	R	M	E	S	L	D	R	I	L	E	F	G	N	K	K	Y	S	F	S	E	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	B	T	T	T	B																T	T	T					T	T	G	G	G	G	T	T	T														T	T		T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	R	M	A	E	E	K	N	N	Y	Y	V	S	L	I	D	E	I	T	S	N	D	I	L	P	G	I	E	S	L	L	I	D	V	K	S	N	N	I	K	I	G	L	S	S	A	S	K	N	A	I	N	V	L	N	H	L	G	I	S	D	K	F	D	F	I	A	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T			G	G	G	S		T	T											T	T								S		T	T									T		G	G	G		S					G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	C	K	N	N	K	P	H	P	E	I	F	L	M	S	A	K	G	L	N	V	N	P	Q	N	C	I	G	I	E	D	A	S	A	G	I	D	A	I	N	S	A	N	M	F	S	V	G	V	G	N	Y	E	N	L	K	K	A	N	L	V	V	D	S	T	N	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			S		T	T	S	S											T			G	G	G						S	S										T	T							S		T	T	T	T	T	T	S	S				S	S	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	F	E	Y	I	Q	E	K	Y	N	E	Y	I	V	R	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)