PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4ggbA_

Fold library id	PDB Header	Molecule	Title
c4ggbA_	PDB header: isomerase	Chain: A: PDB Molecule: putative uncharacterized protein;	PDBTitle: crystal structure of a proposed galactarolactone cycloisomerase from2 agrobacterium tumefaciens, target efi-500704, with bound ca,3 disordered loops

Links to external resources
Added to library: Sat Sep 1 14:22:13 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I T A V R T H L L H V L V E I E C D D G T V G W G E C L G P A R P N A A V V Q A Y S G W L I G Q D P R Q T E K I W A V L Y N A L R D Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
T T S
T T
T G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q R G L S L T A L S G I D I A L W D I K G K H Y G A S I S M L L G G R W R E S V R A Y A T G D R V S D N A S E M A E R R A E G F H A C K I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
B T T
S
S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I G F G V E E D L R V I A A V R E A I G P D M R L M I D A N H G Y T V T E A I T L G D R A A G F G I D W F E E P V V P E Q L D A Y A R V R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
T T
S
G G G
S
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G Q P I P V A G G E T W H G R Y G M W Q A L S A G A V D I L Q P D L C G C G G F S E I Q K I A T L A T L H G V R I V P H V W G T G V Q I A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T S
S T
S
B T T T T T T T
B
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . .

Sequence A L Q F M A A M T P D P V R V N P I E P I M E F D R T H N P F R Q A V L R E P L E A V N G V V T I P D G P G L G I E I N R D A L T E F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S T T B S S
T T
S S B T S
B
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	T	A	V	R	T	H	L	L	H	V	L	V	E	I	E	C	D	D	G	T	V	G	W	G	E	C	L	G	P	A	R	P	N	A	A	V	V	Q	A	Y	S	G	W	L	I	G	Q	D	P	R	Q	T	E	K	I	W	A	V	L	Y	N	A	L	R	D	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S								S	S																	T	T	S		T	T													T	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	R	G	L	S	L	T	A	L	S	G	I	D	I	A	L	W	D	I	K	G	K	H	Y	G	A	S	I	S	M	L	L	G	G	R	W	R	E	S	V	R	A	Y	A	T	G	D	R	V	S	D	N	A	S	E	M	A	E	R	R	A	E	G	F	H	A	C	K	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T		B					T	T			S		S																								T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	G	F	G	V	E	E	D	L	R	V	I	A	A	V	R	E	A	I	G	P	D	M	R	L	M	I	D	A	N	H	G	Y	T	V	T	E	A	I	T	L	G	D	R	A	A	G	F	G	I	D	W	F	E	E	P	V	V	P	E	Q	L	D	A	Y	A	R	V	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																	T	T	T	S							T	T		S													G	G	G			S						S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	Q	P	I	P	V	A	G	G	E	T	W	H	G	R	Y	G	M	W	Q	A	L	S	A	G	A	V	D	I	L	Q	P	D	L	C	G	C	G	G	F	S	E	I	Q	K	I	A	T	L	A	T	L	H	G	V	R	I	V	P	H	V	W	G	T	G	V	Q	I	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S						T	T	S		S											T			S					B	T	T	T	T	T															T	T						B			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Sequence	A	L	Q	F	M	A	A	M	T	P	D	P	V	R	V	N	P	I	E	P	I	M	E	F	D	R	T	H	N	P	F	R	Q	A	V	L	R	E	P	L	E	A	V	N	G	V	V	T	I	P	D	G	P	G	L	G	I	E	I	N	R	D	A	L	T	E	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S			S	S											S	S						T	T	B	S	S						T	T							S	S	B	T	S			B		G	G	G