PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gekG_

Fold library id	PDB Header	Molecule	Title
c4gekG_	PDB header: transferase	Chain: G: PDB Molecule: trna (cmo5u34)-methyltransferase;	PDBTitle: crystal structure of wild-type cmoa from e.coli

Links to external resources
Added to library: Sat Oct 20 17:24:06 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L G D W T F D E R V A E V F P D M I Q R S V P G Y S N I I S M I G M L A E R F V Q P G T Q V Y D L G C S L G A A T L S V R R N I H H D N C K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T
T
T T T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I A I D N S P A M I E R C R R H I D A Y K A P T P V D V I E G D I R D I A I E N A S M V V L N F T L Q F L E P S E R Q A L L D K I Y Q G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S
S S
S
T T T
S S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N P G G A L V L S E K F S F E D A K V G E L L F N M H H D F K R A N G Y S E L E I S Q K R S M L E N V M L T D S V E T H K A R L H K A G F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
S S T T G G G S T T
B
T
S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence H S E L W F Q C F N F G S L V A L K A E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	D	W	T	F	D	E	R	V	A	E	V	F	P	D	M	I	Q	R	S	V	P	G	Y	S	N	I	I	S	M	I	G	M	L	A	E	R	F	V	Q	P	G	T	Q	V	Y	D	L	G	C	S	L	G	A	A	T	L	S	V	R	R	N	I	H	H	D	N	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																			S	T	T																		T	T							T		T	T	T									T				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	A	I	D	N	S	P	A	M	I	E	R	C	R	R	H	I	D	A	Y	K	A	P	T	P	V	D	V	I	E	G	D	I	R	D	I	A	I	E	N	A	S	M	V	V	L	N	F	T	L	Q	F	L	E	P	S	E	R	Q	A	L	L	D	K	I	Y	Q	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S														T	S			S	S							S		T	T	T					S								S		G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	P	G	G	A	L	V	L	S	E	K	F	S	F	E	D	A	K	V	G	E	L	L	F	N	M	H	H	D	F	K	R	A	N	G	Y	S	E	L	E	I	S	Q	K	R	S	M	L	E	N	V	M	L	T	D	S	V	E	T	H	K	A	R	L	H	K	A	G	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B			S	S																		T	T	G	G	G	S	T	T														B													T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	H	S	E	L	W	F	Q	C	F	N	F	G	S	L	V	A	L	K	A	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T