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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gdkB_

Fold library idPDB HeaderMoleculeTitle
c4gdkB_PDB header: protein bindingChain: B: PDB Molecule: autophagy protein 5;PDBTitle: crystal structure of human atg12~atg5 conjugate in complex with an n-2 terminal fragment of atg16l1


Added to library: Wed Jan 9 15:14:11 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVMRQEDISEIWFEY
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Known secondary structure (DSSP)
T

TTS

SS



TTS

TTS
GGG



 .........80.........90.........100.........110.........120.........130.........140
Sequence EGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVI
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Known secondary structure (DSSP) TT

TTS
TTS
SS
SS

TTT





TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQL
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Known secondary structure (DSSP) TSS
TT
TGGG


TTSSS
SS


TTSSSS




SB
TTS
B
 .........220.........230.........240.........250.........260.......
Sequence HTLGDLLKEVCPSAIDKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQPTD
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Known secondary structure (DSSP)
B
GGG


BTTB


TTSBS

TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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