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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4gdgA_

Fold library idPDB HeaderMoleculeTitle
c4gdgA_PDB header: hydrolaseChain: A: PDB Molecule: 3'(2'),5'-bisphosphate nucleotidase, putative;PDBTitle: structural and functional characterization of 3'(2'),5'-bisphosphate2 nucleotidase1 from entamoeba histolytica


Added to library: Sat Aug 3 08:31:22 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSFDKELALALEIVQVSCKITTSVAEHTLTDQTQIKNDKSPVTVGDYSVQAYVNKKIHETFPEDQIVAEE
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Known secondary structure (DSSP)


TS
SGGG
TTS

TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DTKTIPEDIFAKVCKHVQIYSDMKDDEIRKSIDLGNSTGGKGRHWVLDPIDGTLGFLRREQYAVCLAFMI
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Known secondary structure (DSSP)
STT

TT



TTB


SSS
TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence DGDIKVGVLGCPNFEGGLIVAAQKGCGAKMFSVNDIKNGKDIHVSTTPKTSDMCFCESVEVSHTDQSRSK
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Known secondary structure (DSSP) TTTTSTT
TTS
TT






GGG


SSTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TITERLQVTKPPVRMDSQCKYMAIASGRADVYLRLPRNLSYQEKIWDHAAGYLIVKEAGGKVTDIYGNDL
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Known secondary structure (DSSP) TT

S



STTS
S

SSSS


BGGGTTT

TTS
B
 .........290.........300.........310.......
Sequence DFSLGRTLCNNHGIVASNGILHEETVNVVKDVLSDLK
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Known secondary structure (DSSP)
TTSSSB
TT

S
STTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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