PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gctA_

Fold library id	PDB Header	Molecule	Title
c4gctA_	PDB header: dna binding protein/dna	Chain: A: PDB Molecule: nucleoid occlusion factor slma;	PDBTitle: structure of no factor protein-dna complex

Links to external resources
Added to library: Sat Jun 22 10:51:13 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I N R R E E I L Q A L A E M L E S N E G A S R I T T A K L A K Q V G V S E A A L Y R H F P S K T R M F E G L I E F I E E S L M S R I N R I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G S
T T T S
T T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D E E K D T L N R I R L V M Q L L L A F A E R N P G L T R I L S G H A L M F E N E R L R D R I N Q L F E R I E T S L R Q I L R E R K S F P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S G G G G S
G G G
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . .

Sequence D E N I L A A Q L L G Q V E G S L N R F V R S D F K Y L P T A N F D E Y W A L L S A Q I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	N	R	R	E	E	I	L	Q	A	L	A	E	M	L	E	S	N	E	G	A	S	R	I	T	T	A	K	L	A	K	Q	V	G	V	S	E	A	A	L	Y	R	H	F	P	S	K	T	R	M	F	E	G	L	I	E	F	I	E	E	S	L	M	S	R	I	N	R	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	G	G	G	S										T	T	T	S						T	T	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	E	E	K	D	T	L	N	R	I	R	L	V	M	Q	L	L	L	A	F	A	E	R	N	P	G	L	T	R	I	L	S	G	H	A	L	M	F	E	N	E	R	L	R	D	R	I	N	Q	L	F	E	R	I	E	T	S	L	R	Q	I	L	R	E	R	K	S	F	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	S	S	G	G	G	G	S																							G	G	G				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Sequence	D	E	N	I	L	A	A	Q	L	L	G	Q	V	E	G	S	L	N	R	F	V	R	S	D	F	K	Y	L	P	T	A	N	F	D	E	Y	W	A	L	L	S	A	Q	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T	T		S		T	T	T	T												T