Fold library entry viewer: c4gapB_

Added to library: Sat Sep 8 15:44:11 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	V	I	D	P	Q	H	S	D	K	P	N	V	L	I	L	G	S	G	W	G	A	I	S	F	L	K	H	I	D	T	K	K	Y	N	V	S	I	I	S	P	R	S	Y	F	L	F	T	P	L	L	P	S	A	P	V	G	T	V	D	E	K	S	I	I	E	P	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S								S	S										S		T	T	T								S							G	G	G	G	G	G	T	T	T	T	S	S		G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	F	A	L	K	K	K	G	N	V	T	Y	Y	E	A	E	A	T	S	I	N	P	D	R	N	T	V	T	I	K	S	L	S	A	V	S	Q	L	Y	Q	P	E	N	H	L	G	L	H	Q	A	E	P	A	E	I	K	Y	D	Y	L	I	S	A	V	G	A	E	P	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		S														T	T	T	T														T										T	T								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	G	I	P	G	V	T	D	Y	G	H	F	L	K	E	I	P	N	S	L	E	I	R	R	T	F	A	A	N	L	E	K	A	N	L	L	P	K	G	D	P	E	R	R	R	L	L	S	I	V	V	V	G	G	G	P	T	G	V	E	A	A	G	E	L	Q	D	Y	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T									S	S																					S		S	S								T								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	D	L	R	K	F	L	P	A	L	A	E	E	V	Q	I	H	L	V	E	A	L	P	I	V	L	N	M	F	E	K	K	L	S	S	Y	A	Q	S	H	L	E	N	T	S	I	K	V	H	L	R	T	A	V	A	K	V	E	E	K	Q	L	L	A	K	T	K	H	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																			S	S	S	S	S	S	T	T	S															T	T					T	T								S	S									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	K	I	T	E	E	T	I	P	Y	G	T	L	I	W	A	T	G	N	K	A	R	P	V	I	T	D	L	F	K	K	I	P	E	Q	N	S	S	K	R	G	L	A	V	N	D	F	L	Q	V	K	G	S	N	N	I	F	A	I	G	D	N	A	F	A	G	L	P	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S																					S	G	G	G	T	T			S	S			B		T	T	S	B	B	T	T		S	S					G	G	G			S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	Q	V	A	H	Q	E	A	E	Y	L	A	K	N	F	D	K	M	A	Q	I	P	N	F	Q	K	I	D	L	L	F	E	E	N	N	F	K	P	F	K	Y	N	D	L	G	A	L	A	Y	L	G	S	E	R	A	I	A	T	I	R	S	G	K	R	T	F	Y	T	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T		G	G	G										T	T																	T	T									T	T							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Sequence	G	L	M	T	F	Y	L	W	R	I	L	Y	L	S	M	I	L	S	A	R	S	R	L	K	V	F	F	D	W	I	K	L	A	F	F	K	R	D	F	F	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														T		S																								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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