PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4gakA_

Fold library id	PDB Header	Molecule	Title
c4gakA_	PDB header: hydrolase	Chain: A: PDB Molecule: acyl-acp thioesterase;	PDBTitle: crystal structure of acyl-acp thioesterase from spirosoma linguale

Links to external resources
Added to library: Sat Sep 22 14:29:10 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N A X A F I Q T D T F T L R G Y E C D A F G R X S I P A L X N L X Q E S A N R N A I D Y G I G I A D L A Q K G V G W X L X R F C L R I H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G B
T T S B B
T
S T T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y P R Y G D T I Q L X T Y P T T V D K Y F I H R D F R V L A T D G T L L A D A R S T W L V F S X E K R S X V P L P D F I R Q L S P P A N V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
S S T T
T T T T
T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P L P A L P L K P D F Q T A S F A T A A S K S V Q V G W L N I D Q N Q H V N N V A Y V Q W L L E G V D S E I V Q T R E I A E I D L V Y R T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G G
T T S
G G G B
T T S S B
T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250

Sequence S H W H D W L S V Q S V T E T D N S V L H R I S Q T E S G K D V L L A R S R W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	A	X	A	F	I	Q	T	D	T	F	T	L	R	G	Y	E	C	D	A	F	G	R	X	S	I	P	A	L	X	N	L	X	Q	E	S	A	N	R	N	A	I	D	Y	G	I	G	I	A	D	L	A	Q	K	G	V	G	W	X	L	X	R	F	C	L	R	I	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												G	G	G	B		T	T	S	B	B																					T		S						T	T	T													S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	P	R	Y	G	D	T	I	Q	L	X	T	Y	P	T	T	V	D	K	Y	F	I	H	R	D	F	R	V	L	A	T	D	G	T	L	L	A	D	A	R	S	T	W	L	V	F	S	X	E	K	R	S	X	V	P	L	P	D	F	I	R	Q	L	S	P	P	A	N	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T	T														S	S											T	T																T	T	T	T											T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	P	A	L	P	L	K	P	D	F	Q	T	A	S	F	A	T	A	A	S	K	S	V	Q	V	G	W	L	N	I	D	Q	N	Q	H	V	N	N	V	A	Y	V	Q	W	L	L	E	G	V	D	S	E	I	V	Q	T	R	E	I	A	E	I	D	L	V	Y	R	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		G	G	G	G				T	T	S									G	G	G	B		T	T	S	S	B												T	S																			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Sequence	S	H	W	H	D	W	L	S	V	Q	S	V	T	E	T	D	N	S	V	L	H	R	I	S	Q	T	E	S	G	K	D	V	L	L	A	R	S	R	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												T	T									T	T	T