Fold library entry viewer: c4gaaA_

Added to library: Sat Jun 15 08:42:00 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	P	S	S	F	A	S	P	E	K	F	N	I	K	H	M	H	L	K	L	H	V	D	F	T	S	R	A	I	A	A	S	T	S	L	T	V	R	S	L	Q	D	S	L	A	S	L	I	L	D	T	K	D	L	T	I	K	K	V	A	V	N	G	K	D	A	T	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S	S		T	T	T														T	T	T	T														S	T	T									S	S									S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	T	T	H	S	F	K	G	T	P	L	E	I	T	L	P	F	S	L	T	R	G	Q	E	V	I	V	E	I	D	S	V	T	S	P	K	S	S	A	L	Q	W	L	N	K	E	Q	T	A	G	K	I	H	P	Y	L	F	S	Q	C	Q	A	T	H	C	R	S	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S									S	S				S	S													T	T		T	T						T	T	T	S	S	S	S	S	S								T	T	T	T	G	G	G	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	C	Q	D	T	P	S	V	K	F	T	Y	Y	S	Q	V	S	V	P	K	E	L	M	A	L	M	S	A	L	R	D	G	E	L	S	E	Q	S	D	S	N	R	K	I	Y	R	F	K	Q	N	V	P	I	P	S	Y	L	I	A	L	V	V	G	A	L	E	G	R	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S	T	T													T	T	S					S	S									S	S		T	T														G	G	G							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	P	R	T	T	I	W	T	E	K	E	L	L	E	P	S	V	Y	E	F	A	E	T	E	K	M	L	K	Y	A	E	D	L	A	G	P	Y	V	W	G	Q	Y	D	L	L	I	L	P	P	S	F	P	Y	G	G	M	E	N	P	C	L	T	F	V	T	P	T	V	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																	T	T	T																	S	S									T	T		S	S	S					T	T						G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	D	R	S	L	A	S	V	I	A	H	E	I	S	H	S	W	T	G	N	L	V	T	N	E	T	W	E	N	F	W	L	N	E	G	H	T	V	Y	L	E	R	R	I	D	G	R	L	Y	G	E	E	F	R	Q	F	K	A	L	G	G	W	K	E	L	Q	N	S	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T	T										T	T	B	T	T	T	B			S	S	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	F	G	A	T	N	P	L	T	N	L	V	P	N	L	H	E	V	D	V	D	A	A	F	S	S	V	P	Y	E	K	G	F	A	L	L	F	Y	L	E	Q	L	L	G	G	P	E	I	F	L	G	F	L	K	S	Y	I	Q	M	F	A	F	K	S	V	T	T	E	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		G	G	G	S	S	S				T	T			T	T	T	T			S																		T																	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	K	F	L	Y	S	Y	F	K	D	K	V	D	I	L	D	K	V	D	W	K	G	W	M	H	T	P	G	M	P	P	V	Q	P	K	Y	D	M	T	L	A	N	A	C	I	T	L	G	Q	K	W	V	K	A	T	E	S	D	L	G	S	F	S	A	D	D	V	K	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	S	S					T	T	S							S			S	S		S	S							T	T	T															T	T	T	G	G	G			T					T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	S	H	Q	L	I	E	V	L	A	I	L	L	L	E	K	P	L	P	V	S	H	V	K	R	M	Q	E	V	Y	N	L	N	D	V	K	N	S	E	I	R	F	R	W	L	R	L	C	I	R	A	G	W	E	D	V	I	P	L	A	L	A	M	A	T	E	Q	G	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S																G	G	G																		T		G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Sequence	K	F	T	R	P	L	Y	R	D	L	Y	N	F	E	K	A	R	E	Q	T	V	N	T	F	L	K	N	R	S	F	M	H	P	V	T	E	M	L	V	A	K	D	L	H	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	T	T	T										T	T	T	T	S	S												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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