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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ga5H_

Fold library idPDB HeaderMoleculeTitle
c4ga5H_PDB header: transferaseChain: H: PDB Molecule: putative thymidine phosphorylase;PDBTitle: crystal structure of amp phosphorylase c-terminal deletion mutant in2 the apo-form


Added to library: Sat May 25 08:38:20 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKAKIRILDMFSGRYTVLINEEDAKEAKLHPDDLVKIEAGKKAVYGSVALSNLVGKGEVGISRDVLDLHN
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Known secondary structure (DSSP)
S


SS

T

TT
SSS

TTS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FSEGETVSVIPAGTPESVRYIKKKMHGEKLRKVEIEAIVRDIVDRKLRDIEISSFVTALEINGLDMDEIA
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Known secondary structure (DSSP)

TT



TTT



TSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence ALTIAMAETGDMLDIDRKPIMDVHSIGGVPGNKTNILVVPIVAAAGLTIPKTSSRAITSAAGTADVVEVF
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Known secondary structure (DSSP) S




SS

B



TT

T
B


SSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ADVSFSLDEIKRIVEKVGACLVWGGALNLAPADDITIKAERALSIDPTGLMLASIMSKKYAMGSQYVLID
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Known secondary structure (DSSP) S




SSSSS

ST


T
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IPTGKGVKVETVEEARSLARDFIELGKRLGQYVEVAITYGGQPIGHTVGPALEAREALSALMTGKGPGSL
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Known secondary structure (DSSP) STTSSB

TT

SS
SSSB
SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence IEKATGLAGILLEMGGVAPAGTGKKMAKEILESGKAWEKMKEIIEAQGGDPNIKPEEIPIGDKTYTFTAA
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Known secondary structure (DSSP) TSS
TT
TTS
TT

GGGS


S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence TSGYVTAIDNRAITAIARAAGAPEDKGAGIELYVKVGEKVKEGDPLFTIHAEHEARLDQAIVLARRTEPI
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Known secondary structure (DSSP) S



TTTTSTT



TT

TT
SS

 ...
Sequence RIE
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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