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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4g9uD_

Fold library idPDB HeaderMoleculeTitle
c4g9uD_PDB header: transferaseChain: D: PDB Molecule: thymidylate synthase;PDBTitle: crystal structure of trichinella spiralis thymidylate synthase2 complexed with dump


Added to library: Sat Jul 27 08:33:22 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YVNQEELNYLNQLKDIIDHGVRKNDRTGIGTLSTFGTQSRYCLRDDIFPLLTTKRVFWRGVVEELLWFIS
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Known secondary structure (DSSP)




TTSS
GGGB



SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence GSTNAKQLSEKNVNIWDGNSSREFLDSRGLYNYEEGDLGPVYGFQWRHFGCPYSSMTADYKGKGYDQLQQ
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Known secondary structure (DSSP) T

BTTTT

TTTGGGST
TTS
TTB

S
BTS



TTS

TT
SB
 .........150.........160.........170.........180.........190.........200.........210
Sequence CIKMIREEPESRRIIMTAWNPCDLEKVALPPCHCFVQFYVADGELSCQMYQRSADMGLGVPFNIASYSLL
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Known secondary structure (DSSP)
TT
S




GGGTTSSSS

STTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TRMIAHITSLKPGFFIHTIGDAHVYLTHVDALKVQMERKPRPFPKLKILRNVENIDDFRAEDFELINYKP
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Known secondary structure (DSSP) TT
GGGTTS






S


SGGG

GGGS


 ..
Sequence YP
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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