PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4g6zA_

Fold library id	PDB Header	Molecule	Title
c4g6zA_	PDB header: ligase	Chain: A: PDB Molecule: glutamate-trna ligase;	PDBTitle: crystal structure of a glutamyl-trna synthetase glurs from2 burkholderia thailandensis bound to l-glutamate

Links to external resources
Added to library: Sat Aug 4 13:36:13 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R P V R T R F A P S P T G F I H L G N I R S A L Y P W A F A R K M K G T F V L R I E D T D V E R S S Q E A V D A I L E G M A W L G L D Y D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B T T
G G G
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G P Y Y Q M Q R M D R Y R E V L A Q M Q E K G L V Y P Y M R Y D G T W R P E P G K V L P E P P A G V A P V L R F R N P L T G T V A W D D A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
T T S
T T
T T
T T
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K G R V E I S N E E L D D L V V A R P D G T P M Y N F C V V V D D L D M G I T H V I R G D D H V N N T P R Q I N I L R A L G G E V P V Y A H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G
T T S
B
T T
G G G G G G T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L P T V L N E Q G E K M S K R H G A M S V M G Y R D A G Y L P E A V L N Y L A R L G W S H G D A E I F T R E Q F V E W F D L E H L G K S P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S B
T T T T
B T T
T S S B
T T
G G G B
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Q Y D H N K L N W L N N H Y I K E A D D A R L A G L A K P F F A A L G I D A G A I E Q G P D L V S V M G L M K D R A S T V K E I A E N S A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S S
T T
S S G G

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380

Sequence F Y R A P A H T P S I D A V L L L F G R D V V V S R I E A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T S
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	V	R	T	R	F	A	P	S	P	T	G	F	I	H	L	G	N	I	R	S	A	L	Y	P	W	A	F	A	R	K	M	K	G	T	F	V	L	R	I	E	D	T	D	V	E	R	S	S	Q	E	A	V	D	A	I	L	E	G	M	A	W	L	G	L	D	Y	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S			B																	T	T												G	G	G																T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	P	Y	Y	Q	M	Q	R	M	D	R	Y	R	E	V	L	A	Q	M	Q	E	K	G	L	V	Y	P	Y	M	R	Y	D	G	T	W	R	P	E	P	G	K	V	L	P	E	P	P	A	G	V	A	P	V	L	R	F	R	N	P	L	T	G	T	V	A	W	D	D	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G															T	T	S										T	T				T	T								T	T												S	S							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	R	V	E	I	S	N	E	E	L	D	D	L	V	V	A	R	P	D	G	T	P	M	Y	N	F	C	V	V	V	D	D	L	D	M	G	I	T	H	V	I	R	G	D	D	H	V	N	N	T	P	R	Q	I	N	I	L	R	A	L	G	G	E	V	P	V	Y	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							G	G	G									T	T	S		B													T	T								G	G	G	G	G	G											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	P	T	V	L	N	E	Q	G	E	K	M	S	K	R	H	G	A	M	S	V	M	G	Y	R	D	A	G	Y	L	P	E	A	V	L	N	Y	L	A	R	L	G	W	S	H	G	D	A	E	I	F	T	R	E	Q	F	V	E	W	F	D	L	E	H	L	G	K	S	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S	B			T	T	T	T			B							T	T												T	S	S	B			T	T															G	G	G	B		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	Y	D	H	N	K	L	N	W	L	N	N	H	Y	I	K	E	A	D	D	A	R	L	A	G	L	A	K	P	F	F	A	A	L	G	I	D	A	G	A	I	E	Q	G	P	D	L	V	S	V	M	G	L	M	K	D	R	A	S	T	V	K	E	I	A	E	N	S	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S															T	T	T									S	S											T	T		S	S									G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Sequence	F	Y	R	A	P	A	H	T	P	S	I	D	A	V	L	L	L	F	G	R	D	V	V	V	S	R	I	E	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	S						S									S