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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4g68A_

Fold library idPDB HeaderMoleculeTitle
c4g68A_PDB header: transport proteinChain: A: PDB Molecule: abc transporter;PDBTitle: biochemical and structural insights into xylan utilization by the2 thermophilic bacteriumcaldanaerobius polysaccharolyticus


Added to library: Sat Aug 25 14:51:03 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITLTFWNLFTGEPAKTKVKEIIDQWNKENPNVQIVESVTENDAYKTKIKAAIAANEAPDIFQTWAGGFSQ
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Known secondary structure (DSSP)



STT
TTS

TT


STTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PFVEAGKVLQLDSYLNDGTKDQLLPGSFDNVTYNGKIYGIPFDQQASVLYINKELFDKYNVKVPTTFSEL
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Known secondary structure (DSSP) TT
B


GGGSSSSGGGGB
TTTTGGGTT

T




B
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDAIKTFKSKGVTPFALGEKDEWPGXWYYDXIALREGGVQLTRDALNGKASFDNQAFTDAAQKLQDXVNA
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Known secondary structure (DSSP) TT

SB



TTS
TTSS
S

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GAFDSGFMGLTRDEATAEFNQGKAAXYFGGNFDAAAFVSDPSSLVKGKIEAVRFPTIEGGKGDPTEYIGG
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Known secondary structure (DSSP) T
B
TTGGG

TT

SGGGTSTT
S
TTT


B
TT

S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TVGALXVSANSKYKDEAVRAAKYLAKQLSDMDYLIATGLPAWKYDNIDQSKVDPLEIQIMNNIVANAKGS
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Known secondary structure (DSSP) BTT
S
TSSSB

TTS
GGGS
TTTT


 .........360.........370.........380.........390..
Sequence VPAWDIYLSGDAAQTHKDLVAQLFAKQITPEEYSKQXQQKIN
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Known secondary structure (DSSP)

S
TT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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