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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4g0hA_

Fold library idPDB HeaderMoleculeTitle
c4g0hA_PDB header: toxinChain: A: PDB Molecule: cytotoxicity-associated immunodominant antigen;PDBTitle: crystal structure of the n-terminal domain of helicobacter pylori caga2 protein


Added to library: Sat Aug 25 14:12:36 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LMGSHNGIKVSLLYAGNGGFGDKHDWNATVGYKNVATLINVHMKNGSGLVIAGGEKGINNPSFYLYKEDQ
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B

B


SSS


SS




TTS

SSS

S
T
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTGSQRALSQEEIRNKVDFMEFLAQNNTKLDNLSEKEKEKFQNEIEDFQKDSKAYLDALGNDRIAFVSKK
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Known secondary structure (DSSP) TTT


TT
GGG

S

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence DTKHSALITEFNNGDLSYTLKDYKNVTLQGSLKHDGVMFVDYSNGFNKVAVFNLPDLNNLAITSFVRRNL
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SSSTT

S
TTTTS




SS
TTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTGNYDEVKKAQKDLEKSLRKREHLEK
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Known secondary structure (DSSP) T




 .........290.........300.........310.........320.........330.........340.........350
Sequence EVEKKLESKSKNKMEAKAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKDFS
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G
 .........360.........370.........380.........390.........400.........410.........420
Sequence KSFSKAEETLKALKGSVKDLGIPEWISKVENLNAALNEFKNKVTQAKSDLENSVKDVIINQKVTDKVDNL
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Known secondary structure (DSSP) GG

TT





T
 .........430.........440.........450
Sequence NQAVSVAKAMGDFSRVEQVLADLKNFSKEQ
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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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