PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4fzwD_

Fold library id	PDB Header	Molecule	Title
c4fzwD_	PDB header: isomerase/lyase	Chain: D: PDB Molecule: 1,2-epoxyphenylacetyl-coa isomerase;	PDBTitle: crystal structure of the paaf-paag hydratase-isomerase complex from2 e.coli

Links to external resources
Added to library: Sat Sep 22 14:45:28 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F I L S H V E K G V M T L T L N R P E R L N S F N D E M H A Q L A E C L K Q V E R D D T I R C L L L T G A G R G F C A G Q D L N A P D L G M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T S
B
T T
S T T
S B
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S V E R F Y N P L V R R L A K L P K P V I C A V N G V A A G A G A T L A L G G D I V I A A R S A K F V M A F S K L G L I P D C G G T W L L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S
T T S S T T
G G G G T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V A G R A R A M G L A L L G N Q L S A E Q A H E W G M I W Q V V D D E T L A D T A Q Q L A R H L A T Q P T F G L G L I K Q A I N S A E T N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S S S
T T S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250

Sequence T L D T Q L D L E R D Y Q R L A G R S A D Y R E G V S A F L A K R S P Q F T G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	I	L	S	H	V	E	K	G	V	M	T	L	T	L	N	R	P	E	R	L	N	S	F	N	D	E	M	H	A	Q	L	A	E	C	L	K	Q	V	E	R	D	D	T	I	R	C	L	L	L	T	G	A	G	R	G	F	C	A	G	Q	D	L	N	A	P	D	L	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									T	T	T	T	S		B																			T	T									S	T	T		S	B			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	V	E	R	F	Y	N	P	L	V	R	R	L	A	K	L	P	K	P	V	I	C	A	V	N	G	V	A	A	G	A	G	A	T	L	A	L	G	G	D	I	V	I	A	A	R	S	A	K	F	V	M	A	F	S	K	L	G	L	I	P	D	C	G	G	T	W	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T												S	S								S				T								T	S	S						T	T							G	G	G	G	T				T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	A	G	R	A	R	A	M	G	L	A	L	L	G	N	Q	L	S	A	E	Q	A	H	E	W	G	M	I	W	Q	V	V	D	D	E	T	L	A	D	T	A	Q	Q	L	A	R	H	L	A	T	Q	P	T	F	G	L	G	L	I	K	Q	A	I	N	S	A	E	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																								T	S	S	S																				T	T	S																T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Sequence	T	L	D	T	Q	L	D	L	E	R	D	Y	Q	R	L	A	G	R	S	A	D	Y	R	E	G	V	S	A	F	L	A	K	R	S	P	Q	F	T	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S												T	T	S