PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4fvaD_

Fold library id	PDB Header	Molecule	Title
c4fvaD_	PDB header: hydrolase	Chain: D: PDB Molecule: 5'-tyrosyl-dna phosphodiesterase;	PDBTitle: crystal structure of truncated caenorhabditis elegans tdp2

Links to external resources
Added to library: Sat Nov 3 15:41:32 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E D L K G F E V S V M S W N I D G L D G R S L L T R M K A V A H I V K N V N P D I L F L Q E V V D R D L A P I D K L Q S L Y K I Y Y S N K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T
T T
S
S T T
G G G G T S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C Q Y Y T A I L V S K M F D V E K H D V I H F Q N S G M Y R T L Q I L E G S I G G L K V F L L N T H L E S T R E H R P Q R C A Q F G F C M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T T S
T T
S S
T T
S G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V R E I I A Q N P G A L V F F G G D L N L R D E E V S R V P D G V K D A W E A A G S D N K T K F T W D T F K N D N K Q G G A K M R F D R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G
T T
T T
G G G
S T T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence Y W S G P L D K V K F T L E G R Q R I R S C L C F P S D H W A I N A T F F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
T T T
S
S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	D	L	K	G	F	E	V	S	V	M	S	W	N	I	D	G	L	D	G	R	S	L	L	T	R	M	K	A	V	A	H	I	V	K	N	V	N	P	D	I	L	F	L	Q	E	V	V	D	R	D	L	A	P	I	D	K	L	Q	S	L	Y	K	I	Y	Y	S	N	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T												T	T			T	T																		S									S	T	T						G	G	G	G	T						S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	Q	Y	Y	T	A	I	L	V	S	K	M	F	D	V	E	K	H	D	V	I	H	F	Q	N	S	G	M	Y	R	T	L	Q	I	L	E	G	S	I	G	G	L	K	V	F	L	L	N	T	H	L	E	S	T	R	E	H	R	P	Q	R	C	A	Q	F	G	F	C	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								T	T	S											T	T		S	S												T	T													S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	R	E	I	I	A	Q	N	P	G	A	L	V	F	F	G	G	D	L	N	L	R	D	E	E	V	S	R	V	P	D	G	V	K	D	A	W	E	A	A	G	S	D	N	K	T	K	F	T	W	D	T	F	K	N	D	N	K	Q	G	G	A	K	M	R	F	D	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T													G	G	G						T	T								T	T			G	G	G			S			T	T	T			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	Y	W	S	G	P	L	D	K	V	K	F	T	L	E	G	R	Q	R	I	R	S	C	L	C	F	P	S	D	H	W	A	I	N	A	T	F	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S												S			T	T	T		S		S		S	S