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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4fu0B_

Fold library idPDB HeaderMoleculeTitle
c4fu0B_PDB header: ligaseChain: B: PDB Molecule: d-alanine--d-alanine ligase 7;PDBTitle: crystal structure of vang d-ala:d-ser ligase from enterococcus2 faecalis


Added to library: Sat Sep 22 14:46:50 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNL
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Known secondary structure (DSSP)


SSTTS
TTT
SS


S
TTT
TTT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence CPVVVSQNRSVKGFLEIYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHK
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Known secondary structure (DSSP)


TTT



S


SSSTT

BSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LVSLAGISVPKSVTFKRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFEHDTE
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Known secondary structure (DSSP) TT
B


STT

SSSS
SSSTT
SSGGGTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VIVEETINGFEVGCAVLGIDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPARIDAEAEKRIQEAAVT
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Known secondary structure (DSSP)


SSSS




TTTTB

SS




SS
SS
 .........290.........300.........310.........320.........330.........340...
Sequence IYKALGCSGFSRVDMFYTPSGEIVFNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKLIGLYV
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Known secondary structure (DSSP) TT


TT

SS


STTSTTT

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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