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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4frxB_

Fold library idPDB HeaderMoleculeTitle
c4frxB_PDB header: transport proteinChain: B: PDB Molecule: anaerobically-induced outer membrane porin opre;PDBTitle: crystal structure of pseudomonas aeruginosa occk8 (opre)


Added to library: Sat Jul 27 09:16:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGFIEDSKASLTLRNFYINTDNRNSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLGTVFPLESN
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Known secondary structure (DSSP)

TTTT







SSSS


SS
B
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHS
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Known secondary structure (DSSP) SSB
STT

TT


SSSS



STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGP
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Known secondary structure (DSSP)
TT
SSB

TTT
SSSTT


BS

SSSTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNG
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Known secondary structure (DSSP)
GGGGSTT

B

STT



TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARGD
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Known secondary structure (DSSP) SB







TT


B

STT

SS



STT
GGGGT
TT

TTSS
 .........360.........370.........380.........390.........400
Sequence QSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGDQDENRLIVSYTLPLL
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Known secondary structure (DSSP)

SSTTTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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