PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4fofA_

Fold library id	PDB Header	Molecule	Title
c4fofA_	PDB header: signaling protein	Chain: A: PDB Molecule: methyl-accepting chemotaxis protein;	PDBTitle: crystal structure of the blue-light absorbing form of the2 thermosynechococcus elongatus pixj gaf-domain

Links to external resources
Added to library: Tue Jan 22 09:10:42 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A V Q L S E L R D R Q A I F E T L V A K G R E L L A C D R V I V Y A F D D N Y V G T V V A E S V A E G W P Q A R D Q V I E D P C F R E H W V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S
T T
T T S
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E A Y R Q G R I Q A T T D I F K A G L T E C H L N Q L R P L K V R A N L V V P M V I D D Q L F G L L I A H Q A S E P R Q W Q E I E I D Q F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
G G G S
G G G T
S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . .

Sequence E L A S T G S L V L E R L H F L E Q T I A S L H H H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	Q	L	S	E	L	R	D	R	Q	A	I	F	E	T	L	V	A	K	G	R	E	L	L	A	C	D	R	V	I	V	Y	A	F	D	D	N	Y	V	G	T	V	V	A	E	S	V	A	E	G	W	P	Q	A	R	D	Q	V	I	E	D	P	C	F	R	E	H	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S																					T		S									T	T												T	T	S				T	T						T					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	Y	R	Q	G	R	I	Q	A	T	T	D	I	F	K	A	G	L	T	E	C	H	L	N	Q	L	R	P	L	K	V	R	A	N	L	V	V	P	M	V	I	D	D	Q	L	F	G	L	L	I	A	H	Q	A	S	E	P	R	Q	W	Q	E	I	E	I	D	Q	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T						S		G	G	G	S											G	G	G	T		S										T	T												S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Sequence	E	L	A	S	T	G	S	L	V	L	E	R	L	H	F	L	E	Q	T	I	A	S	L	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T