Fold library entry viewer: c4fnvA_

Added to library: Wed Jan 9 15:17:36 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	V	D	P	Q	V	F	E	A	I	N	L	N	Y	P	G	L	E	K	V	K	E	F	Y	E	A	G	E	H	Y	Y	A	A	N	A	L	L	E	Y	Y	R	T	R	T	N	V	T	N	P	N	L	S	L	I	N	V	T	I	S	E	A	E	Q	A	K	A	D	Y	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T						B		T	T	S	T	T										T	T																		S				T	T				S	S														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	D	Y	R	F	H	V	N	N	F	Y	E	D	K	E	T	L	K	P	Y	S	V	K	Q	D	G	G	I	N	W	E	Y	S	P	K	D	A	S	D	E	Y	Q	K	Q	L	H	R	H	Q	W	F	I	P	Q	A	K	A	Y	R	V	S	G	D	E	K	Y	I	Q	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	B			B	T	T	B		S	B	G	G	G	T	B			B				T	T				T	T				T	T										T	T	T	T	T														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	E	V	Y	K	N	W	I	E	N	N	P	K	P	T	T	G	P	N	T	T	S	W	W	Q	L	Q	V	S	T	R	I	G	D	Q	V	Q	L	L	E	Y	F	K	N	S	V	N	F	T	P	E	W	L	S	T	F	L	V	E	F	A	E	Q	A	D	F	L	V	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S			S	S	T	T																				T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	Y	E	S	G	G	N	I	L	I	S	Q	A	N	A	L	A	T	A	G	T	L	M	P	E	F	K	N	A	E	K	W	M	N	T	G	Y	Q	I	L	S	E	E	V	Q	N	Q	I	M	S	D	G	W	H	K	E	M	S	L	H	Y	H	I	G	I	V	A	D	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																				T	T	B	T	T																			S	B		T	T	S		B	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	A	M	K	L	A	E	A	N	Q	L	S	S	K	L	P	S	D	F	T	E	P	L	R	K	A	A	E	V	V	M	Y	F	T	Y	P	N	Y	F	I	K	G	S	D	N	V	V	P	M	F	N	D	S	W	S	R	T	R	N	V	L	K	N	T	N	F	K	Q	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		G	G	G	S		T	T	T	T													T	S		G	G	G	G	S			S	S			S				S	S												T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	M	F	P	D	S	E	E	L	K	Y	M	Q	T	A	G	N	G	G	T	A	Q	G	R	T	P	N	N	D	M	K	L	F	D	Q	A	G	Y	Y	V	L	R	N	G	W	T	P	A	S	T	V	M	I	L	S	N	N	K	S	N	D	A	S	N	S	L	S	A	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T											G	G	G					S					S						T	T	T	T						S		S	S	T	T										B		B	T	T	B				S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	N	Q	P	D	N	G	T	F	E	L	Y	H	N	G	R	N	F	F	P	D	S	G	V	C	T	Y	Y	T	S	G	G	D	N	D	L	R	Y	W	F	R	G	I	D	K	H	N	T	L	S	I	G	K	Q	N	I	K	K	A	A	G	K	L	L	K	S	E	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S		T	T							T	T			S	S				B							T	T	S											G	G	G	S	S	S				T	T				S			B									S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	E	L	V	V	F	E	N	Q	G	Y	D	N	L	K	H	R	R	A	V	F	Y	V	N	K	K	F	F	V	L	V	D	E	G	I	G	N	A	E	G	T	I	N	L	S	F	N	L	C	E	G	T	A	S	E	V	V	M	D	T	D	K	N	G	V	H	T	A	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T	T											T	T	T										S	S																T	T	T					G	G	G	T							T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	N	N	N	I	I	V	R	T	F	A	N	K	A	V	T	C	S	P	F	T	G	R	I	A	Y	L	V	D	G	A	Y	N	T	R	Q	S	Y	T	I	D	M	N	K	S	A	D	E	T	A	R	Y	I	T	V	I	L	P	V	N	G	S	T	D	T	S	S	I	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											S	S												B	S	S	S	S	S																T	T														S			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Sequence	K	F	I	D	S	G	Y	S	E	N	S	A	S	V	E	V	S	V	N	G	E	T	H	T	L	S	Y	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S		B	T	T									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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