Fold library entry viewer: c4fnrB_

Added to library: Sat Oct 6 12:55:45 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	Q	F	H	L	R	A	G	K	A	S	Y	V	M	Q	L	F	R	S	G	Y	L	A	H	V	Y	W	G	K	A	V	R	D	V	R	G	A	R	A	F	P	R	L	D	R	A	F	S	P	N	P	D	P	S	D	R	T	F	S	L	D	T	L	L	Q	E	Y	P	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									T	T	T												S				S	T	T								T	T				S	S	T	T		T	T			G	G	G	S		B	S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	N	T	D	F	R	A	P	A	Y	Q	V	Q	L	E	N	G	S	T	V	T	D	L	R	Y	K	T	H	R	I	Y	K	G	K	P	R	L	N	G	L	P	A	T	Y	V	E	H	E	Q	E	A	E	T	L	E	I	V	L	G	D	A	L	I	G	L	E	V	T	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S			S			S						T	T	S																S					T	T							S	S	G	G	G											T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	T	A	Y	E	K	W	N	V	I	T	R	S	A	R	F	E	N	K	G	G	E	R	L	K	L	L	R	A	L	S	M	S	V	D	F	P	T	A	D	Y	D	W	I	H	L	P	G	A	W	G	R	E	R	W	I	E	R	R	P	L	V	T	G	V	Q	A	A	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S												S	S	S															S												B	T	T	B											S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	R	G	A	S	S	H	Q	Q	N	P	F	I	A	L	V	A	K	N	A	D	E	H	Q	G	E	V	Y	G	F	S	F	V	Y	S	G	N	F	L	A	Q	I	E	V	D	Q	F	G	T	A	R	V	S	M	G	I	N	P	F	D	F	T	W	L	L	Q	P	G	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			S	S										T	T			S	S	S	B										S	S										T	T	S											T	T							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	Q	T	P	E	V	V	M	V	Y	S	D	Q	G	L	N	G	M	S	Q	T	Y	H	E	L	Y	R	T	R	L	A	R	G	A	F	R	D	R	E	R	P	I	L	I	N	N	W	E	A	T	Y	F	D	F	N	E	E	K	I	V	N	I	A	R	T	A	A	E	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	B																	T			S	T	T	S	S	S													T	T																		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	E	L	V	V	L	D	D	G	W	F	G	E	R	D	D	D	R	R	S	L	G	D	W	I	V	N	R	R	K	L	P	N	G	L	D	G	L	A	K	Q	V	N	E	L	G	L	Q	F	G	L	W	V	E	P	E	M	V	S	P	N	S	E	L	Y	R	K	H	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			B	T	T		S	S	S	S	S		T	T				B		T	T	T		T	T											T	T	T									T	T				S	S	S							T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	W	C	L	H	V	P	N	R	P	R	S	E	G	R	N	Q	L	V	L	D	Y	S	R	E	D	V	C	D	Y	I	I	E	T	I	S	N	V	L	A	S	A	P	I	T	Y	V	K	W	D	M	N	R	H	M	T	E	I	G	S	S	A	L	P	P	E	R	Q	R	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B				T	T	S					B	T	T	B			B		T	T	S																T	T	T	T														S				S	S	S		G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	H	R	Y	M	L	G	L	Y	R	V	M	D	E	I	T	S	R	F	P	H	I	L	F	E	S	C	S	G	G	G	G	R	F	D	P	G	M	L	Y	Y	M	P	Q	T	W	T	S	D	N	T	D	A	V	S	R	L	K	I	Q	Y	G	T	S	L	V	Y	P	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S						S	S	S	S	T	T		S					T	T		S						S				T	T										T	T	T	S		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	M	G	A	H	V	S	A	V	P	N	H	Q	V	G	R	V	A	S	L	K	T	R	G	H	V	A	M	S	G	N	F	G	Y	E	L	D	I	T	K	L	T	E	T	E	K	Q	M	M	K	Q	Q	V	A	F	Y	K	D	V	R	R	L	V	Q	F	G	T	F	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B							S	S		S	S	S														T	T	S						S		T	T	S																			T							S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	L	S	P	F	E	G	N	E	A	A	W	M	F	V	S	A	D	R	S	E	A	L	V	A	Y	F	R	V	L	A	E	A	N	A	P	L	S	Y	L	R	L	K	G	L	D	S	N	Q	D	Y	E	I	E	G	L	G	V	Y	G	G	D	E	L	M	Y	A	G	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S	S									S	S	S	S													T	T										S			T	T	S					T	T	T											T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
Sequence	L	P	Y	R	S	S	D	F	I	S	M	M	W	R	L	K	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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