PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4fn6B_

Fold library id	PDB Header	Molecule	Title
c4fn6B_	PDB header: transcription	Chain: B: PDB Molecule: thiaminase-2;	PDBTitle: structural characterization of thiaminase type ii tena from2 staphylococcus aureus

Links to external resources
Added to library: Wed Jan 9 16:50:01 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E F S Q K L Y Q A A K P I I N D I Y E D D F I Q K M L L G N I Q A D A L R H Y L Q A D A A Y L K E F T N L Y A L L I P K M N S M N D V K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T S T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L V E Q I E F M V E G E V L A H D I L A Q I V G E S Y E E I I K T K V W P P S G D H Y I K H M Y F Q A H S R E N A I Y T I A A M A P P Y I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S
T T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A E L A K R S Q S D H K L N R E K D T A K W F D F Y S T E M D D I I N V F E S L M N K L A E S M S D K E L E Q V K Q V F L E S C I H E R R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S S T T T T T T T T S

. . . . . . . . . 220 . . . .

Sequence F N M A M T L E Q W E F G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	F	S	Q	K	L	Y	Q	A	A	K	P	I	I	N	D	I	Y	E	D	D	F	I	Q	K	M	L	L	G	N	I	Q	A	D	A	L	R	H	Y	L	Q	A	D	A	A	Y	L	K	E	F	T	N	L	Y	A	L	L	I	P	K	M	N	S	M	N	D	V	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S								T	T																	T											T	S	T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	E	Q	I	E	F	M	V	E	G	E	V	L	A	H	D	I	L	A	Q	I	V	G	E	S	Y	E	E	I	I	K	T	K	V	W	P	P	S	G	D	H	Y	I	K	H	M	Y	F	Q	A	H	S	R	E	N	A	I	Y	T	I	A	A	M	A	P	P	Y	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T													T	S						T	T	S																							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	E	L	A	K	R	S	Q	S	D	H	K	L	N	R	E	K	D	T	A	K	W	F	D	F	Y	S	T	E	M	D	D	I	I	N	V	F	E	S	L	M	N	K	L	A	E	S	M	S	D	K	E	L	E	Q	V	K	Q	V	F	L	E	S	C	I	H	E	R	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		T	T			S	S	S	T	T								T	T	T	T																T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	F	N	M	A	M	T	L	E	Q	W	E	F	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T