PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4fmrB_

Fold library id	PDB Header	Molecule	Title
c4fmrB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized hypothetical protein;	PDBTitle: crystal structure of a hypothetical protein (bvu_2165) from2 bacteroides vulgatus atcc 8482 at 2.25 a resolution

Links to external resources
Added to library: Sat Aug 18 14:58:32 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G A K N V L K A W L V D N T D K I F Q L E T T R S I D K E I I L D R X V A K N P G V R R E T X A L G I E L X E E V V A E A L X N G E S V N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G L F R G V A Q F R G V A K Q N A W D A A T N S I Y V S L T Q G K A L R E A I K D T R V D V L G E R P T K F Y I G S G Q D A T T R A T D F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
B T T B
T T T
T
S S S
T T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T A G R N F T L F G K N L T V A G T D P S V G V T L A S A A T G T V T K I D N D X I V L N E P S R L I I L L P A S L E D G E Y X L T V T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S S T T
T T T
G G G
S S
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence Q Y R G G G G A L L K T P R S T S H T I Y I G G A P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	A	K	N	V	L	K	A	W	L	V	D	N	T	D	K	I	F	Q	L	E	T	T	R	S	I	D	K	E	I	I	L	D	R	X	V	A	K	N	P	G	V	R	R	E	T	X	A	L	G	I	E	L	X	E	E	V	V	A	E	A	L	X	N	G	E	S	V	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																																					T	T	S																						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	F	R	G	V	A	Q	F	R	G	V	A	K	Q	N	A	W	D	A	A	T	N	S	I	Y	V	S	L	T	Q	G	K	A	L	R	E	A	I	K	D	T	R	V	D	V	L	G	E	R	P	T	K	F	Y	I	G	S	G	Q	D	A	T	T	R	A	T	D	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S									S			B	T	T	B			T	T	T																			T										S	S	S									T	T	T				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	A	G	R	N	F	T	L	F	G	K	N	L	T	V	A	G	T	D	P	S	V	G	V	T	L	A	S	A	A	T	G	T	V	T	K	I	D	N	D	X	I	V	L	N	E	P	S	R	L	I	I	L	L	P	A	S	L	E	D	G	E	Y	X	L	T	V	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S								S						S	S	T	T								T	T	T								G	G	G						S	S								T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	Q	Y	R	G	G	G	G	A	L	L	K	T	P	R	S	T	S	H	T	I	Y	I	G	G	A	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S				S	S