PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4fmoB_

Fold library id	PDB Header	Molecule	Title
c4fmoB_	PDB header: hydrolase	Chain: B: PDB Molecule: dna mismatch repair protein pms1;	PDBTitle: structure of the c-terminal domain of the saccharomyces cerevisiae2 mutl alpha (mlh1/pms1) heterodimer bound to a fragment of exo1

Links to external resources
Added to library: Sat Feb 23 08:25:12 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E L E D F E Q G E K Y L T L T V S K N D F K K M E V V G Q F N L G F I I V T R K V D N K Y D L F I V D Q H A S D E K Y N F E T L Q A V T V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K S Q K L I I P Q P V E L S E L V V L L P V F E K N G F K L K I S R V K L L S L P T S K Q T L F D L G D F N E L I H L I K E L R R D N I R C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T T
B
B T T B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence S K I R S M F A M R A C R S S I M I G K P L N K K T M T R V V H N L S E L D K P W N C P H G R P T M R H L M E L R D W S S F S K D Y E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G S S S
B
T T S
B S
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	L	E	D	F	E	Q	G	E	K	Y	L	T	L	T	V	S	K	N	D	F	K	K	M	E	V	V	G	Q	F	N	L	G	F	I	I	V	T	R	K	V	D	N	K	Y	D	L	F	I	V	D	Q	H	A	S	D	E	K	Y	N	F	E	T	L	Q	A	V	T	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																					T								T	T	T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	S	Q	K	L	I	I	P	Q	P	V	E	L	S	E	L	V	V	L	L	P	V	F	E	K	N	G	F	K	L	K	I	S	R	V	K	L	L	S	L	P	T	S	K	Q	T	L	F	D	L	G	D	F	N	E	L	I	H	L	I	K	E	L	R	R	D	N	I	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T			T					T	T			B													B	T	T	B																				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	S	K	I	R	S	M	F	A	M	R	A	C	R	S	S	I	M	I	G	K	P	L	N	K	K	T	M	T	R	V	V	H	N	L	S	E	L	D	K	P	W	N	C	P	H	G	R	P	T	M	R	H	L	M	E	L	R	D	W	S	S	F	S	K	D	Y	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S			T	T															G	G	G	S	S	S			B		T	T	S		B	S								S							G	G	G