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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4fmmA_

Fold library idPDB HeaderMoleculeTitle
c4fmmA_PDB header: lipid binding proteinChain: A: PDB Molecule: phosphatidylinositol transfer protein pdr16;PDBTitle: dimeric sec14 family homolog 3 from saccharomyces cerevisiae presents2 some novel features of structure that lead to a surprising "dimer-3 monomer" state change induced by substrate binding


Added to library: Sat Mar 2 08:29:53 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKNLINIDKPIKELPASIAIPKEKPLTGEQQKMYDEVLKHFSNPDLKVYTSEKNKSEDDLKPLEEEEKAW
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Known secondary structure (DSSP)




S


S

TTS









TT
S
STT

TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGYENDA
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Known secondary structure (DSSP) S
TTS
T
TTSSGGGT
SS
GGGGTT
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPIGVGKEVLHILQT
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Known secondary structure (DSSP)

GGG

S
S
T

TT




-
TTS





S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVKYVPKNELDSLYGGDLKFKYNHDVYW
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Known secondary structure (DSSP) STT
S

GGGS
TTSS
GGGTS
GGGSBGGGT
S


 .........290.........300.........310.........320....
Sequence PALVETAREKRDHYFKRFQSFGGIVGLSEVDLRGTHEKLLYPVK
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Known secondary structure (DSSP) TTS
TT

S

SS
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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