PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4ffkA_

Fold library id	PDB Header	Molecule	Title
c4ffkA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: superoxide dismutase;	PDBTitle: x-ray structure of iron superoxide dismutase from acidilobus2 saccharovorans

Links to external resources
Added to library: Sat Jun 30 13:37:45 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V V S L K R Y E L P P L P Y N Y D A L E P I I S A E T L R Y H H D K H H L G Y V N G A N A A L D K L E K Y L N G Q L T D I D V R A V S R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T T S
T T T S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F E F N Y G G H I L H T L Y W L N M A P K G K G G G T P G G A I G D A I N K F F G S F D K F K K L F G D A A K N V E G V G W A I L A Y D P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
T T T S
S
S S T
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T G D L R I L Q V E K H N N V V T T N L I P L L A V D V F E H A Y Y I D Y R N D R A K Y V D S W W D L I N W D D V E A R Y Q K A L N T P K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T B S
S S
S G G G T T T
G G G B
T S
S

. .

Sequence I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	V	S	L	K	R	Y	E	L	P	P	L	P	Y	N	Y	D	A	L	E	P	I	I	S	A	E	T	L	R	Y	H	H	D	K	H	H	L	G	Y	V	N	G	A	N	A	A	L	D	K	L	E	K	Y	L	N	G	Q	L	T	D	I	D	V	R	A	V	S	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		T	T	T	T	T	T	T	S											T																					T	T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	E	F	N	Y	G	G	H	I	L	H	T	L	Y	W	L	N	M	A	P	K	G	K	G	G	G	T	P	G	G	A	I	G	D	A	I	N	K	F	F	G	S	F	D	K	F	K	K	L	F	G	D	A	A	K	N	V	E	G	V	G	W	A	I	L	A	Y	D	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	B			T	T	T	S		S															S	S														T		S	S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	D	L	R	I	L	Q	V	E	K	H	N	N	V	V	T	T	N	L	I	P	L	L	A	V	D	V	F	E	H	A	Y	Y	I	D	Y	R	N	D	R	A	K	Y	V	D	S	W	W	D	L	I	N	W	D	D	V	E	A	R	Y	Q	K	A	L	N	T	P	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T	T	T	B	S			S	S										S	G	G	G	T					T	T										G	G	G	B														T	S			S
	.	.
Sequence	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)