PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4ffbC_

Fold library id	PDB Header	Molecule	Title
c4ffbC_	PDB header: hydrolase	Chain: C: PDB Molecule: protein stu2;	PDBTitle: a tog:alpha/beta-tubulin complex structure reveals conformation-based2 mechanisms for a microtubule polymerase

Links to external resources
Added to library: Sat Aug 18 14:51:36 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T L P L E E R L T Y K L W K A R L E A Y K E L N Q L F R N S Q I Y W R D P T L F A Q Y I T D S N V V A Q E Q A I V A L N S L I D A F A L K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T
T T S
T T T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A H N I T L I S T W T P L L V E K G L T S S R A T T K T Q S M S C I L S L C G L D T S I T Q S V E L V I P F F E K K L P K L I A A A A N C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T S S S S G G G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y E L M A A F G L T N V N V Q T F L P E L L K H V P Q L A G H G D R N V R S Q T M N L I V E I Y K V L F K K L K P I Q V K D L H K L F A K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
G G G T
S S T
T T S S
S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence G D L F E W E K R E L E K K R S Q E E E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	L	P	L	E	E	R	L	T	Y	K	L	W	K	A	R	L	E	A	Y	K	E	L	N	Q	L	F	R	N	S	Q	I	Y	W	R	D	P	T	L	F	A	Q	Y	I	T	D	S	N	V	V	A	Q	E	Q	A	I	V	A	L	N	S	L	I	D	A	F	A	L	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S																	T				T	T	S		T							T	T		S	S																T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	H	N	I	T	L	I	S	T	W	T	P	L	L	V	E	K	G	L	T	S	S	R	A	T	T	K	T	Q	S	M	S	C	I	L	S	L	C	G	L	D	T	S	I	T	Q	S	V	E	L	V	I	P	F	F	E	K	K	L	P	K	L	I	A	A	A	A	N	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	S	S																				T	S	S	S	S								G	G	G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	E	L	M	A	A	F	G	L	T	N	V	N	V	Q	T	F	L	P	E	L	L	K	H	V	P	Q	L	A	G	H	G	D	R	N	V	R	S	Q	T	M	N	L	I	V	E	I	Y	K	V	L	F	K	K	L	K	P	I	Q	V	K	D	L	H	K	L	F	A	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T											G	G	G						T		S	S																T			T	T	S	S													S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	G	D	L	F	E	W	E	K	R	E	L	E	K	K	R	S	Q	E	E	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T