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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ff5A_

Fold library idPDB HeaderMoleculeTitle
c4ff5A_PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolase 25;PDBTitle: structure basis of a novel virulence factor ghip a glycosyl hydrolase2 25 of streptococcus pneumoniae participating in host cell invasion


Added to library: Sat Jul 20 08:38:51 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIVRVHSGTTKENDASFINGIDKAYKSHIT
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Known secondary structure (DSSP)
TTTS

TTS
GGG

S
S


S

SSB
TTSBBSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGA
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Known secondary structure (DSSP) TTT




SSGGG

S

S

SSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGFDHDLDINVI
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Known secondary structure (DSSP)


TT


TTSS

TT

SS




SS
S

S

TT

S
 .........220.......
Sequence SPLKNKEETFRKLFLKP
Predicted secondary structure





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Known secondary structure (DSSP)
TTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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