Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4fe4C_

Fold library idPDB HeaderMoleculeTitle
c4fe4C_PDB header: transcriptionChain: C: PDB Molecule: xylose operon regulatory protein;PDBTitle: crystal structure of apo e. coli xylr


Added to library: Thu Jan 10 10:16:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEFRWLGDGVIADFDDKQIEQALADVDVP
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)






SSSTT

S






SSTTSTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

SSGGGS
SS
S



SSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGID
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) SSS






SS
TTTTS
SSSSTTTTTTT

TTTT
BSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQ
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)

SSS


B



TTT













GGG






 .........290.........300.........310.........320.........330.........340.........350
Sequence AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQM
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTTGGG


TTTTTTTTTS
STTTGGGTSS
STTTTTSSTTSSS

S
 .........360.........370.........380
Sequence CGYPSLQYFYSVFKKAYDTTPKEYRDVNSE
Predicted secondary structure








SS confidence





























Known secondary structure (DSSP) TT
SSTTTTTSSS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D