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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c4fcgA_ | PDB header: structural genomics, unknown function | Chain: A: PDB Molecule: uncharacterized protein; | PDBTitle: structure of the leucine-rich repeat domain of the type iii effector2 xcv3220 (xopl) |
Added to library: Sat Jun 16 14:05:27 2012 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | Y | F | Q | T | A | L | R | P | Y | H | D | V | L | S | Q | W | Q | R | H | Y | N | A | D | R | N | R | W | H | S | A | W | R | Q | A | N | S | N | N | P | Q | I | E | T | R | T | G | R | A | L | K | A | T | A | D | L | L | E | D | A | T | Q | P | G | R | V | A | L | E | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | R | S | V | P | L | P | Q | F | P | D | Q | A | F | R | L | S | H | L | Q | H | X | T | I | D | A | A | G | L | X | E | L | P | D | T | X | Q | Q | F | A | G | L | E | T | L | T | L | A | R | N | P | L | R | A | L | P | A | S | I | A | S | L | N | R | L | R | E | L | S | I | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | S | S | S | S | S | G | G | G | G | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | G | G | G | G | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | A | C | P | E | L | T | E | L | P | E | P | L | A | S | T | D | S | G | E | H | Q | G | L | V | N | L | Q | S | L | R | L | E | W | T | G | I | R | S | L | P | A | S | I | A | N | L | Q | N | L | K | S | L | K | I | R | N | S | P | L | S | A | L | G | P | A | I | H | H | L | P |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | G | G | G | G | G | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | K | L | E | E | L | D | L | R | G | C | T | A | L | R | N | Y | P | P | I | F | G | G | R | A | P | L | K | R | L | I | L | K | D | C | S | N | L | L | T | L | P | L | D | I | H | R | L | T | Q | L | E | K | L | D | L | R | G | C | V | N | L | S | R | L | P | S | L | I | A | Q |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | T | T | T | T | B | T | T | ![]() | ![]() | ![]() | T | T | T | T | B | T | T | G | G | G | T | T | ![]() | ![]() | ![]() | T | T | T | T | G | G | G | G | G |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |||||||||||||||
Sequence | L | P | A | N | C | I | I | L | V | P | P | H | L | Q | A | Q | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | ![]() | ![]() | ![]() | G | G | G | S |
Download: | PDB structure | FASTA sequence |
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