PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4fayC_

Fold library id	PDB Header	Molecule	Title
c4fayC_	PDB header: glycerol-binding protein	Chain: C: PDB Molecule: microcompartments protein;	PDBTitle: crystal structure of a trimeric bacterial microcompartment shell2 protein pdub with glycerol metabolites

Links to external resources
Added to library: Thu Jan 10 05:28:47 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V P E F V G A S E I G D T I G M V I P R V D Q Q L L D K L H V T K Q Y K T L G I L S D R T G A G P Q I M A M D E G I K A T N M E C I D V E W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T S S
S
S S
S S S
S T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P R D T K G G G G H G C L I I I G G D D P A D A R Q A I R V A L D N L H R T F G D V Y N A K A G H L E L Q F T A R A A G A A H L G L G A V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
G G G S S S B
S
T T T T T S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K A F G L I C G C P S G I G V V M G D K A L K T A G V E P L N F T S P S H G T S F S N E G C L T I T G D S G A V R Q A V M A G R E V G L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S
B T T B S S S S
S
S

. . . . . . . . . 220 . . . . . . .

Sequence L L S Q F G E E P V N D F P S Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S S
B
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	E	F	V	G	A	S	E	I	G	D	T	I	G	M	V	I	P	R	V	D	Q	Q	L	L	D	K	L	H	V	T	K	Q	Y	K	T	L	G	I	L	S	D	R	T	G	A	G	P	Q	I	M	A	M	D	E	G	I	K	A	T	N	M	E	C	I	D	V	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						T	T	T	T							S	S									S			S	S			S								S	S		S													T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	R	D	T	K	G	G	G	G	H	G	C	L	I	I	I	G	G	D	D	P	A	D	A	R	Q	A	I	R	V	A	L	D	N	L	H	R	T	F	G	D	V	Y	N	A	K	A	G	H	L	E	L	Q	F	T	A	R	A	A	G	A	A	H	L	G	L	G	A	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		G	G	G	S	S	S	B									S																				T	T	T					T	T									S	S													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	A	F	G	L	I	C	G	C	P	S	G	I	G	V	V	M	G	D	K	A	L	K	T	A	G	V	E	P	L	N	F	T	S	P	S	H	G	T	S	F	S	N	E	G	C	L	T	I	T	G	D	S	G	A	V	R	Q	A	V	M	A	G	R	E	V	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S									S															S									B	T	T	B	S	S	S	S		S								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Sequence	L	L	S	Q	F	G	E	E	P	V	N	D	F	P	S	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S	S			B		S	S