Fold library entry viewer: c4f9iA_

Added to library: Sat Jun 16 13:52:27 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	S	E	L	N	T	K	I	V	N	R	G	K	E	F	F	G	S	I	S	G	E	K	P	S	L	F	N	K	G	A	W	M	G	K	A	M	D	W	S	M	Q	N	E	Q	F	K	I	Q	M	F	R	F	V	D	V	F	P	S	L	T	T	S	K	L	L	T	E	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T	T				G	G	G		T	T	S																										G	G	G			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	E	Y	F	G	N	E	Q	D	M	P	A	F	M	A	V	L	N	K	V	L	T	S	N	I	E	E	M	A	R	Q	F	I	V	G	E	T	T	K	E	A	V	K	N	L	E	K	L	R	K	D	G	F	A	A	V	V	D	V	L	G	E	A	T	L	S	E	E	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S		T	T																		T	T		S		S	S														T	T								S			S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	Y	T	N	T	Y	L	E	L	L	E	A	L	K	K	E	Q	G	S	W	K	G	L	P	G	K	G	G	D	P	G	L	D	W	G	H	A	P	K	V	N	I	A	V	K	P	T	A	L	F	C	L	A	N	P	Q	D	F	E	G	S	V	V	A	I	L	D	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T							S	S	S		T	T	S	B	T	T	T	B		S							G	G	G	S		T	T			G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	R	I	F	K	K	V	M	E	L	N	G	F	L	C	I	D	M	E	S	Y	R	H	K	E	I	I	L	E	V	F	R	R	L	K	L	E	Y	R	D	Y	P	H	L	G	I	V	L	Q	A	Y	L	K	D	N	D	K	D	L	D	D	L	L	A	W	A	K	E	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T										G	G	G															T	T	T										T	T	B	T	T															T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	Q	I	S	V	R	L	V	K	G	A	Y	W	D	Y	E	T	V	K	A	K	Q	N	D	W	E	V	P	V	W	T	I	K	A	E	S	D	A	A	Y	E	R	Q	A	R	K	I	L	E	N	H	Q	I	C	H	F	A	C	A	S	H	N	I	R	T	I	S	A	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S											T	T	T					B		S	S																		T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	M	A	R	E	L	N	V	P	E	D	R	Y	E	F	Q	V	L	Y	G	M	A	E	P	V	R	K	G	I	L	K	V	A	G	R	I	R	L	Y	A	P	Y	G	N	M	V	P	G	M	G	Y	L	V	R	R	L	L	E	N	T	A	N	E	S	F	L	R	Q	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			G	G	G							T	T	S												T										S																			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	E	D	A	Q	I	E	R	L	L	E	D	P	A	V	T	V	E	R	E	R	A	A	R	L	G	G	L	P	P	F	N	N	E	A	M	V	D	F	T	R	A	D	H	R	A	A	F	P	K	H	I	A	Q	V	R	T	Q	L	G	K	T	Y	P	L	F	I	N	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S								T	S															T	T	S											T	T	S																T	T										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	V	R	T	N	D	L	I	P	T	V	N	P	N	K	P	S	E	V	L	G	Q	I	C	Q	A	G	T	T	E	V	G	D	A	I	A	A	A	K	A	A	F	P	A	W	R	D	T	D	P	R	T	R	A	E	Y	L	L	K	A	A	Q	A	A	R	K	R	L	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S								T	T																																	T	S																			T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	S	A	W	Q	V	L	E	I	G	K	Q	W	D	Q	A	Y	A	D	V	T	E	A	I	D	F	L	E	Y	Y	A	R	E	M	I	R	L	G	Q	P	Q	R	V	G	H	A	P	G	E	L	N	H	Y	F	Y	E	P	K	G	V	A	A	V	I	A	P	W	N	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T																													T	S								T	T											S								S	S	S	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	A	I	S	M	G	M	A	S	A	A	I	V	T	G	N	C	V	V	F	K	P	S	G	I	T	S	I	I	G	W	H	L	V	E	L	F	R	E	A	G	L	P	E	G	V	F	N	F	T	P	G	R	G	S	V	M	G	D	Y	L	V	D	H	P	D	I	S	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													T	T									G	G	G														T	T			T	T	S																			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	F	T	G	S	M	E	T	G	L	R	I	I	E	R	A	A	K	V	H	P	G	Q	A	N	V	K	K	I	I	S	E	M	G	G	K	N	A	I	I	I	D	D	D	A	D	L	D	E	A	V	P	H	V	L	Y	S	A	F	G	F	Q	G	Q	K	C	S	A	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													T	S			T	T			S																		T	T																G	G	G	G		S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	V	I	V	L	D	A	V	Y	D	K	F	I	E	R	L	V	S	M	A	K	A	T	K	V	G	P	S	E	D	P	A	N	Y	M	G	A	V	A	D	D	K	A	M	K	S	I	K	E	Y	A	E	I	G	K	R	E	G	H	V	L	Y	E	S	P	V	P	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G																	B			T	T	S	T	T		S	B				S	S																		S										S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	Y	F	V	P	M	T	I	I	G	G	I	K	P	E	H	R	I	A	Q	E	E	I	F	G	P	V	L	A	V	M	R	A	K	D	F	D	Q	A	I	E	W	A	N	S	T	Q	F	A	L	T	G	G	I	F	S	R	S	P	E	H	L	A	K	A	R	R	E	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S			T	T	S	G	G	G	T	S				S	S								S	S									T		S	S			S																			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.
Sequence	V	G	N	L	Y	I	N	R	N	N	T	G	A	L	V	E	R	Q	P	F	G	G	A	R	M	S	G	V	G	T	K	A	G	G	P	D	Y	L	L	H	F	M	D	P	R	V	V	T	E	N	T	M	R	R	G	F	A	P	I	E	E	D	D	D	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					S	S		S					T	T	T	S		B				G	G	G	B	S	S			B	T	S	T	T	T	G	G	G	G												B	T	T	B					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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