PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4f8cC_

Fold library id	PDB Header	Molecule	Title
c4f8cC_	PDB header: cell cycle/protein binding	Chain: C: PDB Molecule: cycle inhibiting factor;	PDBTitle: structure of the cif:nedd8 complex - yersinia pseudotuberculosis cycle2 inhibiting factor in complex with human nedd8

Links to external resources
Added to library: Sat Jun 23 13:11:25 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N P S I Q H V Q D F A T L S A R S L R A N V L L N S D D H S V P I H A K N P S E L L E A I D N N I S Q T A Q D W G V S I Q E V E V I L G S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
T T S
G G G
T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K R I I E P V A G V T A N T I M K L F L D N D I F S Y S F E K G Q S L S L S Q L Q E R L A S L P A H K N F I L R V N D G G L G H A Y V I D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S S
G G G S
T S
T T S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P A T T N P S R D A F L Y Q S D L G E G V T R E V R F E D W M T Q K A S H P I S L D D I N T H F I G I A Q D Q I D L A H I A K L F D V D G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
B
B
S S S
B
T T T S
B
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence V K M L R A D H L I S H K T S E F N F Q L F E Y D L K N L E N N M S I I K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
G G G
G G G T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	P	S	I	Q	H	V	Q	D	F	A	T	L	S	A	R	S	L	R	A	N	V	L	L	N	S	D	D	H	S	V	P	I	H	A	K	N	P	S	E	L	L	E	A	I	D	N	N	I	S	Q	T	A	Q	D	W	G	V	S	I	Q	E	V	E	V	I	L	G	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T									T				T	T	S		G	G	G																						T	S												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	R	I	I	E	P	V	A	G	V	T	A	N	T	I	M	K	L	F	L	D	N	D	I	F	S	Y	S	F	E	K	G	Q	S	L	S	L	S	Q	L	Q	E	R	L	A	S	L	P	A	H	K	N	F	I	L	R	V	N	D	G	G	L	G	H	A	Y	V	I	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																				S	S	S					G	G	G	S													T	S			T	T	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	A	T	T	N	P	S	R	D	A	F	L	Y	Q	S	D	L	G	E	G	V	T	R	E	V	R	F	E	D	W	M	T	Q	K	A	S	H	P	I	S	L	D	D	I	N	T	H	F	I	G	I	A	Q	D	Q	I	D	L	A	H	I	A	K	L	F	D	V	D	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S			B						B				S	S	S			B									T	T	T	S		B														T	T													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	V	K	M	L	R	A	D	H	L	I	S	H	K	T	S	E	F	N	F	Q	L	F	E	Y	D	L	K	N	L	E	N	N	M	S	I	I	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			G	G	G			G	G	G	T	T																						T