PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4f7oB_

Fold library id	PDB Header	Molecule	Title
c4f7oB_	PDB header: hydrolase	Chain: B: PDB Molecule: cop9 signalosome complex subunit 5;	PDBTitle: crystal structure of csn5

Links to external resources
Added to library: Fri Feb 1 11:44:49 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A A S G S G X A Q K T W E L A N N X Q E A Q S I D E I Y K Y D K K Q Q Q E I L A A K P W T K D H H Y F K Y C K I S A L A L L K X V X H A R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
B
T T T T T
S S
B T T B T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G G N L E V X G L X L G K V D G E T X I I X D S F A L P V E G T E T R V N A Q A A A Y E Y X A A Y I E N A K Q V G R L E N A I G W Y H S H P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T
S T T T T T
S S T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G Y G C W L S G I D V S T Q X L N Q Q F Q E P F V A V V I D P T R T I S A G K V N L G A F R T Y P K G Y K P P D K Q Y Y A L E V S Y F K S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
S
S S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . .

Sequence L D R K L L E L L W N K Y W V N T L S S S S L L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	S	G	S	G	X	A	Q	K	T	W	E	L	A	N	N	X	Q	E	A	Q	S	I	D	E	I	Y	K	Y	D	K	K	Q	Q	Q	E	I	L	A	A	K	P	W	T	K	D	H	H	Y	F	K	Y	C	K	I	S	A	L	A	L	L	K	X	V	X	H	A	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S												T	T		B				T	T	T	T	T		S	S														B	T	T	B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	G	N	L	E	V	X	G	L	X	L	G	K	V	D	G	E	T	X	I	I	X	D	S	F	A	L	P	V	E	G	T	E	T	R	V	N	A	Q	A	A	A	Y	E	Y	X	A	A	Y	I	E	N	A	K	Q	V	G	R	L	E	N	A	I	G	W	Y	H	S	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S												T	T															S	T	T	T	T	T		S	S																T	T													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Y	G	C	W	L	S	G	I	D	V	S	T	Q	X	L	N	Q	Q	F	Q	E	P	F	V	A	V	V	I	D	P	T	R	T	I	S	A	G	K	V	N	L	G	A	F	R	T	Y	P	K	G	Y	K	P	P	D	K	Q	Y	Y	A	L	E	V	S	Y	F	K	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S				S													S		S													S	S													S	S																			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Sequence	L	D	R	K	L	L	E	L	L	W	N	K	Y	W	V	N	T	L	S	S	S	S	L	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																		S		S	S