PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4f3qA_

Fold library id	PDB Header	Molecule	Title
c4f3qA_	PDB header: transcription	Chain: A: PDB Molecule: transcriptional regulatory protein cbu_1566;	PDBTitle: structure of a yebc family protein (cbu_1566) from coxiella burnetii

Links to external resources
Added to library: Sat Jun 30 13:38:36 2012

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K W A N I K H A K A R Q D A K R G K V F T K L I R E I T V A A R L G G E D I D S N P R L R A V V D K A F A A N X P K D T I T R A I K R G A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L V E V R Y E G Y G P S G V A V X V D C L T D N K N R T V A E V R H A F S K C D G N L G T E G S V A Y L F K Q R G L I T F P P N S D E E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T T
T T S S G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I X E I A L E V G A E D V T T N D D G S I D V T T L P E D F E K I R N A X K A A D L N P S H A E V T V L A S T E V G L D K D S A E Q X L R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T S
G G G T T
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence T E X L E D L D D V Q N V Y S N A D Y P E E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	W	A	N	I	K	H	A	K	A	R	Q	D	A	K	R	G	K	V	F	T	K	L	I	R	E	I	T	V	A	A	R	L	G	G	E	D	I	D	S	N	P	R	L	R	A	V	V	D	K	A	F	A	A	N	X	P	K	D	T	I	T	R	A	I	K	R	G	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																				S		G	G	G														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	V	E	V	R	Y	E	G	Y	G	P	S	G	V	A	V	X	V	D	C	L	T	D	N	K	N	R	T	V	A	E	V	R	H	A	F	S	K	C	D	G	N	L	G	T	E	G	S	V	A	Y	L	F	K	Q	R	G	L	I	T	F	P	P	N	S	D	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												G	G	G										S																T	T						T	T	S	S	G	G	G											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	X	E	I	A	L	E	V	G	A	E	D	V	T	T	N	D	D	G	S	I	D	V	T	T	L	P	E	D	F	E	K	I	R	N	A	X	K	A	A	D	L	N	P	S	H	A	E	V	T	V	L	A	S	T	E	V	G	L	D	K	D	S	A	E	Q	X	L	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		S						T	T	S								G	G	G											T	T				S									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	T	E	X	L	E	D	L	D	D	V	Q	N	V	Y	S	N	A	D	Y	P	E	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S	T	T												G	G	G